PyMOL>load ./XCR50_R3_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./XCR50_R3_em_bcr3.pdb.iupac" loaded as "XCR50_R3_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 1199 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color3, [0, 143, 255] Color: "color3" defined as [ 0.000, 0.561, 1.000 ]. PyMOL>color color3, resi 3 Executive: Colored 19 atoms. PyMOL>set_color color4, [0, 55, 255] Color: "color4" defined as [ 0.000, 0.216, 1.000 ]. PyMOL>color color4, resi 4 Executive: Colored 14 atoms. PyMOL>set_color color5, [0, 191, 255] Color: "color5" defined as [ 0.000, 0.749, 1.000 ]. PyMOL>color color5, resi 5 Executive: Colored 19 atoms. PyMOL>set_color color6, [54, 255, 0] Color: "color6" defined as [ 0.212, 1.000, 0.000 ]. PyMOL>color color6, resi 6 Executive: Colored 21 atoms. PyMOL>set_color color7, [0, 43, 255] Color: "color7" defined as [ 0.000, 0.169, 1.000 ]. PyMOL>color color7, resi 7 Executive: Colored 17 atoms. PyMOL>set_color color8, [0, 141, 255] Color: "color8" defined as [ 0.000, 0.553, 1.000 ]. PyMOL>color color8, resi 8 Executive: Colored 24 atoms. PyMOL>set_color color29, [0, 255, 164] Color: "color29" defined as [ 0.000, 1.000, 0.643 ]. PyMOL>color color29, resi 29 Executive: Colored 20 atoms. PyMOL>set_color color32, [47, 255, 0] Color: "color32" defined as [ 0.184, 1.000, 0.000 ]. PyMOL>color color32, resi 32 Executive: Colored 16 atoms. PyMOL>set_color color33, [0, 106, 255] Color: "color33" defined as [ 0.000, 0.416, 1.000 ]. PyMOL>color color33, resi 33 Executive: Colored 20 atoms. PyMOL>set_color color34, [0, 250, 255] Color: "color34" defined as [ 0.000, 0.980, 1.000 ]. PyMOL>color color34, resi 34 Executive: Colored 19 atoms. PyMOL>set_color color40, [255, 173, 0] Color: "color40" defined as [ 1.000, 0.678, 0.000 ]. PyMOL>color color40, resi 40 Executive: Colored 19 atoms. PyMOL>show sticks, res 40 PyMOL>set_color color43, [255, 230, 0] Color: "color43" defined as [ 1.000, 0.902, 0.000 ]. PyMOL>color color43, resi 43 Executive: Colored 10 atoms. PyMOL>show sticks, res 43 PyMOL>set_color color44, [0, 111, 255] Color: "color44" defined as [ 0.000, 0.435, 1.000 ]. PyMOL>color color44, resi 44 Executive: Colored 21 atoms. PyMOL>set_color color48, [255, 0, 0] Color: "color48" defined as [ 1.000, 0.000, 0.000 ]. PyMOL>color color48, resi 48 Executive: Colored 16 atoms. PyMOL>show sticks, res 48 PyMOL>set_color color49, [255, 0, 0] Color: "color49" defined as [ 1.000, 0.000, 0.000 ]. PyMOL>color color49, resi 49 Executive: Colored 14 atoms. PyMOL>show sticks, res 49 PyMOL>set_color color51, [0, 223, 255] Color: "color51" defined as [ 0.000, 0.875, 1.000 ]. PyMOL>color color51, resi 51 Executive: Colored 19 atoms. PyMOL>set_color color52, [0, 15, 255] Color: "color52" defined as [ 0.000, 0.059, 1.000 ]. PyMOL>color color52, resi 52 Executive: Colored 24 atoms. PyMOL>set_color color59, [0, 255, 184] Color: "color59" defined as [ 0.000, 1.000, 0.722 ]. PyMOL>color color59, resi 59 Executive: Colored 19 atoms. PyMOL>set_color color60, [255, 236, 0] Color: "color60" defined as [ 1.000, 0.925, 0.000 ]. PyMOL>color color60, resi 60 Executive: Colored 12 atoms. PyMOL>show sticks, res 60 PyMOL>set_color color62, [255, 242, 0] Color: "color62" defined as [ 1.000, 0.949, 0.000 ]. PyMOL>color color62, resi 62 Executive: Colored 14 atoms. PyMOL>show sticks, res 62 PyMOL>set_color color63, [0, 222, 255] Color: "color63" defined as [ 0.000, 0.871, 1.000 ]. PyMOL>color color63, resi 63 Executive: Colored 20 atoms. PyMOL>set_color color68, [0, 12, 255] Color: "color68" defined as [ 0.000, 0.047, 1.000 ]. PyMOL>color color68, resi 68 Executive: Colored 19 atoms. PyMOL>set_color color71, [0, 119, 255] Color: "color71" defined as [ 0.000, 0.467, 1.000 ]. PyMOL>color color71, resi 71 Executive: Colored 24 atoms. PyMOL>set_color color72, [0, 4, 255] Color: "color72" defined as [ 0.000, 0.016, 1.000 ]. PyMOL>color color72, resi 72 Executive: Colored 19 atoms. PyMOL>label 40/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 43/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 48/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 49/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 60/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 62/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 1.07 sec. = 3364.7 frames/hour (1.07 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit