PyMOL>load ./XCR50_R3Cons_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./XCR50_R3Cons_em_bcr3.pdb.iupac" loaded as "XCR50_R3Cons_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 1197 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color3, [0, 251, 255] Color: "color3" defined as [ 0.000, 0.984, 1.000 ]. PyMOL>color color3, resi 3 Executive: Colored 19 atoms. PyMOL>set_color color4, [0, 112, 255] Color: "color4" defined as [ 0.000, 0.439, 1.000 ]. PyMOL>color color4, resi 4 Executive: Colored 14 atoms. PyMOL>set_color color5, [0, 255, 252] Color: "color5" defined as [ 0.000, 1.000, 0.988 ]. PyMOL>color color5, resi 5 Executive: Colored 19 atoms. PyMOL>set_color color6, [0, 255, 250] Color: "color6" defined as [ 0.000, 1.000, 0.980 ]. PyMOL>color color6, resi 6 Executive: Colored 21 atoms. PyMOL>set_color color7, [0, 122, 255] Color: "color7" defined as [ 0.000, 0.478, 1.000 ]. PyMOL>color color7, resi 7 Executive: Colored 17 atoms. PyMOL>set_color color8, [0, 218, 255] Color: "color8" defined as [ 0.000, 0.855, 1.000 ]. PyMOL>color color8, resi 8 Executive: Colored 24 atoms. PyMOL>set_color color13, [255, 115, 0] Color: "color13" defined as [ 1.000, 0.451, 0.000 ]. PyMOL>color color13, resi 13 Executive: Colored 19 atoms. PyMOL>show sticks, res 13 PyMOL>set_color color16, [0, 230, 255] Color: "color16" defined as [ 0.000, 0.902, 1.000 ]. PyMOL>color color16, resi 16 Executive: Colored 17 atoms. PyMOL>set_color color29, [0, 255, 68] Color: "color29" defined as [ 0.000, 1.000, 0.267 ]. PyMOL>color color29, resi 29 Executive: Colored 20 atoms. PyMOL>set_color color32, [0, 252, 255] Color: "color32" defined as [ 0.000, 0.988, 1.000 ]. PyMOL>color color32, resi 32 Executive: Colored 16 atoms. PyMOL>set_color color33, [0, 133, 255] Color: "color33" defined as [ 0.000, 0.522, 1.000 ]. PyMOL>color color33, resi 33 Executive: Colored 20 atoms. PyMOL>set_color color34, [0, 238, 255] Color: "color34" defined as [ 0.000, 0.933, 1.000 ]. PyMOL>color color34, resi 34 Executive: Colored 19 atoms. PyMOL>set_color color40, [255, 253, 0] Color: "color40" defined as [ 1.000, 0.992, 0.000 ]. PyMOL>color color40, resi 40 Executive: Colored 19 atoms. PyMOL>show sticks, res 40 PyMOL>set_color color41, [0, 53, 255] Color: "color41" defined as [ 0.000, 0.208, 1.000 ]. PyMOL>color color41, resi 41 Executive: Colored 15 atoms. PyMOL>set_color color43, [39, 255, 0] Color: "color43" defined as [ 0.153, 1.000, 0.000 ]. PyMOL>color color43, resi 43 Executive: Colored 10 atoms. PyMOL>set_color color44, [0, 255, 73] Color: "color44" defined as [ 0.000, 1.000, 0.286 ]. PyMOL>color color44, resi 44 Executive: Colored 21 atoms. PyMOL>set_color color47, [0, 174, 255] Color: "color47" defined as [ 0.000, 0.682, 1.000 ]. PyMOL>color color47, resi 47 Executive: Colored 24 atoms. PyMOL>set_color color48, [255, 0, 0] Color: "color48" defined as [ 1.000, 0.000, 0.000 ]. PyMOL>color color48, resi 48 Executive: Colored 16 atoms. PyMOL>show sticks, res 48 PyMOL>set_color color49, [255, 0, 0] Color: "color49" defined as [ 1.000, 0.000, 0.000 ]. PyMOL>color color49, resi 49 Executive: Colored 14 atoms. PyMOL>show sticks, res 49 PyMOL>set_color color50, [0, 165, 255] Color: "color50" defined as [ 0.000, 0.647, 1.000 ]. PyMOL>color color50, resi 50 Executive: Colored 16 atoms. PyMOL>set_color color51, [0, 95, 255] Color: "color51" defined as [ 0.000, 0.373, 1.000 ]. PyMOL>color color51, resi 51 Executive: Colored 19 atoms. PyMOL>set_color color52, [0, 31, 255] Color: "color52" defined as [ 0.000, 0.122, 1.000 ]. PyMOL>color color52, resi 52 Executive: Colored 24 atoms. PyMOL>set_color color54, [0, 14, 255] Color: "color54" defined as [ 0.000, 0.055, 1.000 ]. PyMOL>color color54, resi 54 Executive: Colored 14 atoms. PyMOL>set_color color59, [0, 255, 41] Color: "color59" defined as [ 0.000, 1.000, 0.161 ]. PyMOL>color color59, resi 59 Executive: Colored 19 atoms. PyMOL>set_color color60, [255, 172, 0] Color: "color60" defined as [ 1.000, 0.675, 0.000 ]. PyMOL>color color60, resi 60 Executive: Colored 12 atoms. PyMOL>show sticks, res 60 PyMOL>set_color color61, [243, 255, 0] Color: "color61" defined as [ 0.953, 1.000, 0.000 ]. PyMOL>color color61, resi 61 Executive: Colored 24 atoms. PyMOL>set_color color62, [255, 177, 0] Color: "color62" defined as [ 1.000, 0.694, 0.000 ]. PyMOL>color color62, resi 62 Executive: Colored 14 atoms. PyMOL>show sticks, res 62 PyMOL>set_color color63, [215, 255, 0] Color: "color63" defined as [ 0.843, 1.000, 0.000 ]. PyMOL>color color63, resi 63 Executive: Colored 20 atoms. PyMOL>set_color color64, [0, 61, 255] Color: "color64" defined as [ 0.000, 0.239, 1.000 ]. PyMOL>color color64, resi 64 Executive: Colored 12 atoms. PyMOL>set_color color68, [0, 255, 245] Color: "color68" defined as [ 0.000, 1.000, 0.961 ]. PyMOL>color color68, resi 68 Executive: Colored 19 atoms. PyMOL>set_color color71, [199, 255, 0] Color: "color71" defined as [ 0.780, 1.000, 0.000 ]. PyMOL>color color71, resi 71 Executive: Colored 24 atoms. PyMOL>set_color color72, [0, 255, 168] Color: "color72" defined as [ 0.000, 1.000, 0.659 ]. PyMOL>color color72, resi 72 Executive: Colored 19 atoms. PyMOL>set_color color74, [0, 173, 255] Color: "color74" defined as [ 0.000, 0.678, 1.000 ]. PyMOL>color color74, resi 74 Executive: Colored 10 atoms. PyMOL>label 13/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 40/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 48/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 49/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 60/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 62/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 0.85 sec. = 4231.7 frames/hour (0.85 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit