PyMOL>load ./UUR17A_NMR_em_bcr3.pdb.iupac
HEADER    LIPID BINDING PROTEIN                   22-DEC-09   2KRT
TITLE     SOLUTION NMR STRUCTURE OF A CONSERVED HYPOTHETICAL MEMBRANE
TITLE    2 LIPOPROTEIN OBTAINED FROM UREAPLASMA PARVUM: NORTHEAST
TITLE    3 STRUCTURAL GENOMICS CONSORTIUM TARGET UUR17A (139-239)
COMPND    MOL_ID: 1;
COMPND   2 MOLECULE: CONSERVED HYPOTHETICAL MEMBRANE LIPOPROTEIN;
COMPND   3 CHAIN: A;
COMPND   4 FRAGMENT: RESIDUES 128-239;
COMPND   5 ENGINEERED: YES
 ObjectMolecule: Read secondary structure assignments.
 ObjectMolReadPDBStr: read MODEL 1
 ObjectMolReadPDBStr: read MODEL 2
 ObjectMolReadPDBStr: read MODEL 3
 ObjectMolReadPDBStr: read MODEL 4
 ObjectMolReadPDBStr: read MODEL 5
 ObjectMolReadPDBStr: read MODEL 6
 ObjectMolReadPDBStr: read MODEL 7
 ObjectMolReadPDBStr: read MODEL 8
 ObjectMolReadPDBStr: read MODEL 9
 ObjectMolReadPDBStr: read MODEL 10
 ObjectMolReadPDBStr: read MODEL 11
 ObjectMolReadPDBStr: read MODEL 12
 ObjectMolReadPDBStr: read MODEL 13
 ObjectMolReadPDBStr: read MODEL 14
 ObjectMolReadPDBStr: read MODEL 15
 ObjectMolReadPDBStr: read MODEL 16
 ObjectMolReadPDBStr: read MODEL 17
 ObjectMolReadPDBStr: read MODEL 18
 ObjectMolReadPDBStr: read MODEL 19
 ObjectMolReadPDBStr: read MODEL 20
 CmdLoad: "./UUR17A_NMR_em_bcr3.pdb.iupac" loaded as "UUR17A_NMR_em_bcr3.pdb.iupac".
PyMOL>hide everything, all
PyMOL>dss
PyMOL>set stick_transparency,0.6
 Setting: stick_transparency set to 0.60000.
PyMOL>set cartoon_transparency,0.5
 Setting: cartoon_transparency set to 0.50000.
PyMOL>show cartoon, all
PyMOL>set bg_rgb, [1,1,1]
 Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ].
PyMOL>color blue, all
 Executive: Colored 2013 atoms and 1 object.
PyMOL>set label_color,black
 Setting: label_color set to black.
PyMOL>set label_font_id, 4
 Setting: label_font_id set to 4.
PyMOL>set label_size,3
 Setting: label_size set to 3.00000.
PyMOL>set_color color9, [0, 44, 255]
 Color: "color9" defined as [ 0.000, 0.173, 1.000 ].
PyMOL>color color9, resi 9
 Executive: Colored 20 atoms.
PyMOL>set_color color12, [102, 255, 0]
 Color: "color12" defined as [ 0.400, 1.000, 0.000 ].
PyMOL>color color12, resi 12
 Executive: Colored 19 atoms.
PyMOL>set_color color14, [0, 117, 255]
 Color: "color14" defined as [ 0.000, 0.459, 1.000 ].
PyMOL>color color14, resi 14
 Executive: Colored 14 atoms.
PyMOL>set_color color16, [0, 255, 236]
 Color: "color16" defined as [ 0.000, 1.000, 0.925 ].
PyMOL>color color16, resi 16
 Executive: Colored 19 atoms.
PyMOL>set_color color18, [0, 226, 255]
 Color: "color18" defined as [ 0.000, 0.886, 1.000 ].
PyMOL>color color18, resi 18
 Executive: Colored 19 atoms.
PyMOL>set_color color21, [0, 58, 255]
 Color: "color21" defined as [ 0.000, 0.227, 1.000 ].
PyMOL>color color21, resi 21
 Executive: Colored 14 atoms.
PyMOL>set_color color22, [0, 206, 255]
 Color: "color22" defined as [ 0.000, 0.808, 1.000 ].
PyMOL>color color22, resi 22
 Executive: Colored 20 atoms.
PyMOL>set_color color24, [0, 255, 219]
 Color: "color24" defined as [ 0.000, 1.000, 0.859 ].
PyMOL>color color24, resi 24
 Executive: Colored 20 atoms.
PyMOL>set_color color26, [0, 89, 255]
 Color: "color26" defined as [ 0.000, 0.349, 1.000 ].
PyMOL>color color26, resi 26
 Executive: Colored 19 atoms.
PyMOL>set_color color34, [0, 248, 255]
 Color: "color34" defined as [ 0.000, 0.973, 1.000 ].
PyMOL>color color34, resi 34
 Executive: Colored 21 atoms.
PyMOL>set_color color37, [125, 255, 0]
 Color: "color37" defined as [ 0.490, 1.000, 0.000 ].
PyMOL>color color37, resi 37
 Executive: Colored 19 atoms.
PyMOL>set_color color38, [0, 88, 255]
 Color: "color38" defined as [ 0.000, 0.345, 1.000 ].
PyMOL>color color38, resi 38
 Executive: Colored 19 atoms.
PyMOL>set_color color39, [255, 10, 0]
 Color: "color39" defined as [ 1.000, 0.039, 0.000 ].
PyMOL>color color39, resi 39
 Executive: Colored 14 atoms.
PyMOL>show sticks, res 39
PyMOL>set_color color41, [0, 57, 255]
 Color: "color41" defined as [ 0.000, 0.224, 1.000 ].
PyMOL>color color41, resi 41
 Executive: Colored 17 atoms.
PyMOL>set_color color42, [255, 144, 0]
 Color: "color42" defined as [ 1.000, 0.565, 0.000 ].
PyMOL>color color42, resi 42
 Executive: Colored 19 atoms.
PyMOL>show sticks, res 42
PyMOL>set_color color43, [178, 255, 0]
 Color: "color43" defined as [ 0.698, 1.000, 0.000 ].
PyMOL>color color43, resi 43
 Executive: Colored 21 atoms.
PyMOL>set_color color50, [0, 255, 240]
 Color: "color50" defined as [ 0.000, 1.000, 0.941 ].
PyMOL>color color50, resi 50
 Executive: Colored 19 atoms.
PyMOL>set_color color52, [0, 127, 255]
 Color: "color52" defined as [ 0.000, 0.498, 1.000 ].
PyMOL>color color52, resi 52
 Executive: Colored 19 atoms.
PyMOL>set_color color54, [0, 56, 255]
 Color: "color54" defined as [ 0.000, 0.220, 1.000 ].
PyMOL>color color54, resi 54
 Executive: Colored 17 atoms.
PyMOL>set_color color56, [0, 103, 255]
 Color: "color56" defined as [ 0.000, 0.404, 1.000 ].
PyMOL>color color56, resi 56
 Executive: Colored 22 atoms.
PyMOL>set_color color57, [0, 63, 255]
 Color: "color57" defined as [ 0.000, 0.247, 1.000 ].
PyMOL>color color57, resi 57
 Executive: Colored 21 atoms.
PyMOL>set_color color58, [0, 110, 255]
 Color: "color58" defined as [ 0.000, 0.431, 1.000 ].
PyMOL>color color58, resi 58
 Executive: Colored 17 atoms.
PyMOL>set_color color61, [0, 255, 45]
 Color: "color61" defined as [ 0.000, 1.000, 0.176 ].
PyMOL>color color61, resi 61
 Executive: Colored 19 atoms.
PyMOL>set_color color63, [0, 255, 170]
 Color: "color63" defined as [ 0.000, 1.000, 0.667 ].
PyMOL>color color63, resi 63
 Executive: Colored 19 atoms.
PyMOL>set_color color65, [0, 255, 213]
 Color: "color65" defined as [ 0.000, 1.000, 0.835 ].
PyMOL>color color65, resi 65
 Executive: Colored 19 atoms.
PyMOL>set_color color68, [255, 220, 0]
 Color: "color68" defined as [ 1.000, 0.863, 0.000 ].
PyMOL>color color68, resi 68
 Executive: Colored 20 atoms.
PyMOL>show sticks, res 68
PyMOL>set_color color70, [0, 255, 228]
 Color: "color70" defined as [ 0.000, 1.000, 0.894 ].
PyMOL>color color70, resi 70
 Executive: Colored 21 atoms.
PyMOL>set_color color84, [255, 83, 0]
 Color: "color84" defined as [ 1.000, 0.325, 0.000 ].
PyMOL>color color84, resi 84
 Executive: Colored 19 atoms.
PyMOL>show sticks, res 84
PyMOL>set_color color86, [0, 44, 255]
 Color: "color86" defined as [ 0.000, 0.173, 1.000 ].
PyMOL>color color86, resi 86
 Executive: Colored 19 atoms.
PyMOL>set_color color88, [255, 0, 0]
 Color: "color88" defined as [ 1.000, 0.000, 0.000 ].
PyMOL>color color88, resi 88
 Executive: Colored 19 atoms.
PyMOL>show sticks, res 88
PyMOL>set_color color90, [0, 48, 255]
 Color: "color90" defined as [ 0.000, 0.188, 1.000 ].
PyMOL>color color90, resi 90
 Executive: Colored 19 atoms.
PyMOL>set_color color92, [0, 24, 255]
 Color: "color92" defined as [ 0.000, 0.094, 1.000 ].
PyMOL>color color92, resi 92
 Executive: Colored 12 atoms.
PyMOL>set_color color95, [0, 80, 255]
 Color: "color95" defined as [ 0.000, 0.314, 1.000 ].
PyMOL>color color95, resi 95
 Executive: Colored 14 atoms.
PyMOL>set_color color97, [0, 21, 255]
 Color: "color97" defined as [ 0.000, 0.082, 1.000 ].
PyMOL>color color97, resi 97
 Executive: Colored 17 atoms.
PyMOL>set_color color103, [255, 55, 0]
 Color: "color103" defined as [ 1.000, 0.216, 0.000 ].
PyMOL>color color103, resi 103
 Executive: Colored 19 atoms.
PyMOL>show sticks, res 103
PyMOL>set_color color108, [143, 255, 0]
 Color: "color108" defined as [ 0.561, 1.000, 0.000 ].
PyMOL>color color108, resi 108
 Executive: Colored 20 atoms.
PyMOL>set_color color111, [0, 112, 255]
 Color: "color111" defined as [ 0.000, 0.439, 1.000 ].
PyMOL>color color111, resi 111
 Executive: Colored 14 atoms.
PyMOL>set_color color112, [0, 126, 255]
 Color: "color112" defined as [ 0.000, 0.494, 1.000 ].
PyMOL>color color112, resi 112
 Executive: Colored 14 atoms.
PyMOL>set_color color113, [0, 136, 255]
 Color: "color113" defined as [ 0.000, 0.533, 1.000 ].
PyMOL>color color113, resi 113
 Executive: Colored 21 atoms.
PyMOL>set_color color114, [0, 255, 171]
 Color: "color114" defined as [ 0.000, 1.000, 0.671 ].
PyMOL>color color114, resi 114
 Executive: Colored 19 atoms.
PyMOL>label 39/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 42/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 68/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 84/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 88/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 103/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>orient
PyMOL>ray 800,800
 Ray: render time: 0.70 sec. = 5147.0 frames/hour (0.70 sec. accum.).
PyMOL>png precision.png
 ScenePNG: wrote 800x800 pixel image to file "precision.png".
PyMOL>quit