# Summary of conformationally-restricting constraints and structure quality factors

Analyses performed for user defined residues.

Summary of conformationally-restricting experimental constraints a
NOE-based distance constraints:
Total | 2064
intra-residue [i = j] | 388
sequential [| i - j | = 1] | 611
medium range [1 < | i - j | < 5] | 440
long range [| i - j | ≥ 5] | 625
NOE constraints per restrained residue b | 17.8
Dihedral-angle constraints: | 128
Total number of restricting constraints b | 2192
Total number of restricting constraints per restrained residue b | 18.9
Restricting long-range constraints per restrained residue b | 5.4
Total structures computed | currently unknown
Number of structures used | 20
Residual constraint violations a,c
Distance violations / structure
0.1 - 0.2 Å | 0.9
0.2 - 0.5 Å | 0.1
> 0.5 Å | 0
RMS of distance violation / constraint | 0.00 Å
Maximum distance violation d | 0.24 Å
Dihedral angle violations / structure
1 - 10 ° | 3.6
> 10 ° | 0
RMS of dihedral angle violation / constraint | 0.32 °
Maximum dihedral angle violation d | 3.30 °
RPF scores
Recall | Precision | F-measure | DP-score
0.911 | 0.93 | 0.92 | 0.753
RMSD Values
| all | orderede | Selectedf
All backbone atoms | 1.6 Å | 0.7 Å | 0.7 Å
All heavy atoms | 2.1 Å | 1.1 Å | 1.1 Å
Structure Quality Factors - overall statistics
| Mean score | SD | Z-score g
Procheck G-factor e (phi / psi only) | -0.42 | N/A | -1.34
Procheck G-factor e (all dihedral angles) | -0.40 | N/A | -2.37
Verify3D | 0.26 | 0.0192 | -3.21
ProsaII (-ve) | 0.43 | 0.0577 | -0.91
MolProbity clashscore | 22.04 | 2.5878 | -2.26
General linear model RMSD prediction | 1.97
Ramachandran Plot Summary from Procheck f
Most favoured regions | 85.1%
Additionally allowed regions | 14.5%
Generously allowed regions | 0.4%
Disallowed regions | 0.0%
Ramachandran Plot Statistics from Richardson's lab
Most favoured regions | 94.2%
Allowed regions | 5%
Disallowed regions | 0.8%

a Analysed for residues 1 to 121
b There are 116 residues with conformationally restricting constraints
c Calculated for all constraints for the given residues, using sum over r^-6
d Largest constraint violation among all the reported structures
e Residues with sum of phi and psi order parameters > 1.8
Ordered residue ranges: 6A-55A,60A-70A,74A-108A,110A-114A
f Residues selected based on: User defined residues
Selected residue ranges: 6A-55A,60A-70A,74A-108A,110A-114A
g With respect to mean and standard deviation for for a set of 252 X-ray structures < 500 residues, of resolution <= 1.80 Å, R-factor <= 0.25 and R-free <= 0.28; a positive value indicates a 'better' score
Generated using PSVS 1.4