Running PDBSTAT from Linux 
  Ayuda is on: /farm/software/PdbStat/PdbStat-5.7

  (C)
  (C)  Pdbstat -- A program to evaluate some statistics of macromolecules,
  (C)             given the cartesian coordinates.
  (C)
  (C)  (c) Copyright 1992-2012 Roberto Tejero and Gaetano T. Montelione
  (C)      Center for Advanced Technology and Medicine (CABM)
  (C)      Rutgers University
  (C)
       ** VERSION:  5.7-exp dom mar 10 23:17:04 UTC 2013  ** 
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
       ===============>  W E L C O M E  to PDBStat <================   
 PDBStat has become a tool able (between other things) of:
    a) read and interconvert between DISMAN, DYANA, PDB, DISCOVER, IMPACT 
    b) elaborate some info about the molecule as MW, Radius of gyration, .. 
    c) investigate the setereochemical quality of a protein by evaluating 
       phi, psi, chi1, impropers and chirality 
 The sequence of acts should be: 
       1.- read a file (coords, constr) 
       2.- read a sequence file (can be free format) 
       3.- Follow menu (calculating, writing ...) 

   NOTE: Be aware that if you read in a constraint file you 
         *ALWAYS* need to read a sequence file also

 HAVE FUN AND ENJOY !!
 **** For more info type `help' or `menu' **** 

  --> ... Reading/Loading Distances file  ...  125 distance records read
  --> ... Reading/Loading Dihedral Library .. 1119 library records read

PdbStat> [rea]d [hel]p [his]tory [men]u [phi] [qui]t...

PdbStat>  leyendo PDB 
  > locate_file(): file `temp_bcm_111.pdb' opened for reading 
  > ReadCoordsPdb(): >> HEADER    STRUCTURAL GENOMICS, UNKNOWN FUNCTION   25-OCT-05   2ES9              
  > ReadCoordsPdb(): >> TITLE     CRYSTAL STRUCTURE OF Q8ZRJ2 FROM SALMONELLA TYPHIMURIUM. NESG TARGET  
  > ReadCoordsPdb(): >> TITLE    2 STR65                                                                
  > ReadCoordsPdb(): >> COMPND    MOL_ID: 1;                                                            
  > ReadCoordsPdb(): >> COMPND   2 MOLECULE: PUTATIVE CYTOPLASMIC PROTEIN;                              
   1  > ReadCoordsPdb(): After scanning there is(are) 1 model(s) 

  > ReadCoordsPdb(): *** SUMMARY ***
  > ReadCoordsPdb(): -->   778 ATOM records read from file 
  > ReadCoordsPdb(): -->   778 Regular IUPAC Atoms 
  > ReadCoordsPdb(): -->     0 Pseudo-atoms (DISMAN type) 
  > ReadCoordsPdb(): -->     0 Lone pairs
  > ReadCoordsPdb(): Bye ... 
  > =============================== INFO ================================ 
  > INFO_mol: # atoms:      778 (493 C, 0 H, 150 O, 129 N, 0 S, 0 Q, 6 Metals)
  > INFO_mol: # residues:     100 (Avg. mol. weight: 104.9)
  > INFO_mol: # -- M.W. : 10485.2 g/mol. (10.49 kD)     Estimated RoG <S2>:  12.66 
  > INFO_mol: CenterMass() -- Working PDB model 1 in file, model no. 1 
  > INFO_mol: CenterMass() -- Molecule `temp_bcm_111.pdb' model #1, TOTAL RESIDUES: 100
  > INFO_mol: Radius of Gyration <S2> :    12.6965  angstroms 
  > INFO_mol: Center of Masses: x_cm(55.764), y_cm(56.174), z_cm(34.183) 

  > INFO_res:  TAIEKALDFI GGNTSASVPH SDESTAKGIL KYLHDLGVPV SPEVVVARGE 
  > INFO_res:  QEGWNPEFTK KVAGWAEKVA SGNRILIKNP EYFSTYQEQL KELVLEH
  > INFO_res:  
  > INFO_res:  THR  ALA  ILE  GLU  LYS  ALA  LEU  ASP  PHE  ILE  GLY  GLY  
  > INFO_res:  MSE  ASN  THR  SER  ALA  SER  VAL  PRO  HIS  SER  MSE  ASP  
  > INFO_res:  GLU  SER  THR  ALA  LYS  GLY  ILE  LEU  LYS  TYR  LEU  HIS  
  > INFO_res:  ASP  LEU  GLY  VAL  PRO  VAL  SER  PRO  GLU  VAL  VAL  VAL  
  > INFO_res:  ALA  ARG  GLY  GLU  GLN  GLU  GLY  TRP  ASN  PRO  GLU  PHE  
  > INFO_res:  THR  LYS  LYS  VAL  ALA  GLY  TRP  ALA  GLU  LYS  VAL  ALA  
  > INFO_res:  SER  GLY  ASN  ARG  ILE  LEU  ILE  LYS  ASN  PRO  GLU  TYR  
  > INFO_res:  PHE  SER  THR  TYR  MSE  GLN  GLU  GLN  LEU  LYS  GLU  LEU  
  > INFO_res:  VAL  LEU  GLU  HIS  
  > INFO_res:  
  > INFO_res:   8 ALA     2 ARG     4 ASN     3 ASP     3 GLN    11 GLU  
  > INFO_res:   8 GLY     3 HIS     5 ILE     8 LEU     8 LYS     3 PHE  
  > INFO_res:   5 PRO     7 SER     5 THR     3 TYR     2 TRP     9 VAL  
  > INFO_res:   3 MSE  
  > INFO_res: DISULFIDE: ** NO INFO FOR DISULFIDES IN FILE 
  > ===================================================================== 
  > ReadCoordsPdb():  *** monomer, 1 [1] chains *** 


PdbStat> PdbStat>  ** Model with _NO_ hydrogens, nothing to fix

PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER: ... backbone, heavy, full set? (back/heavy/all/select):   > COORD_writer: Format  (pdb/congen/RasMol) ? :   > COORD_writer: * ---- Wrong typing BUDDY !! ----- *
  > COORD_writer: * Option NOT recognized, type again please *
  > COORD_writer: Format  (pdb/congen/RasMol) ? : 
PdbStat> PdbStat>  ** Model with _NO_ hydrogens, nothing to fix

PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER: ... backbone, heavy, full set? (back/heavy/all/select):   > COORD_writer: Format  (pdb/congen/RasMol) ? :   > COORD_writer: * ---- Wrong typing BUDDY !! ----- *
  > COORD_writer: * Option NOT recognized, type again please *
  > COORD_writer: Format  (pdb/congen/RasMol) ? : 
PdbStat> 
PdbStat>  *END* of program detected, BYE! ...