SECSTR - Secondary structure assignment --------------------------------------- Secondary structure calculation program - copyright by David Keith Smith, 1989 Amended by R A Laskowski, 1992 Enter filename containing coordinates of structure (for file containing ensemble of NMR structures enter @filename; for set of separate PDB files to be processed, enter %filelist, where filelist contains a list of PDB files to be cleaned up) Processing NMR model 1 number of hydrogen bonds is 71 side chain atoms swapped for PHE 18 Processing NMR model 2 number of hydrogen bonds is 70 side chain atoms swapped for TYR 93 PHE 94 Processing NMR model 3 number of hydrogen bonds is 69 side chain atoms swapped for PHE 3 TYR 93 Processing NMR model 4 number of hydrogen bonds is 73 side chain atoms swapped for PHE 18 Processing NMR model 5 number of hydrogen bonds is 74 side chain atoms swapped for PHE 18 TYR 93 Processing NMR model 6 number of hydrogen bonds is 71 side chain atoms swapped for PHE 3 TYR 93 Processing NMR model 7 number of hydrogen bonds is 70 side chain atoms swapped for PHE 3 Processing NMR model 8 number of hydrogen bonds is 71 side chain atoms swapped for PHE 18 TYR 93 PHE 94 Processing NMR model 9 third (+) Hbond (N-C) 26 22 energy -0.54 abandoned third (+) Hbond (N-C) 85 79 energy -0.73 abandoned number of hydrogen bonds is 71 side chain atoms swapped for TYR 93 PHE 94 Processing NMR model 10 number of hydrogen bonds is 70 side chain atoms swapped for PHE 3 PHE 18 Processing NMR model 11 number of hydrogen bonds is 68 side chain atoms swapped for PHE 18 TYR 93 PHE 94 Processing NMR model 12 number of hydrogen bonds is 70 side chain atoms swapped for TYR 93 PHE 94 Processing NMR model 13 number of hydrogen bonds is 75 side chain atoms swapped for PHE 18 Processing NMR model 14 number of hydrogen bonds is 73 Processing NMR model 15 number of hydrogen bonds is 78 side chain atoms swapped for TYR 93 Processing NMR model 16 number of hydrogen bonds is 69 Processing NMR model 17 number of hydrogen bonds is 72 side chain atoms swapped for PHE 18 TYR 93 Processing NMR model 18 third (+) Hbond (N-C) 23 21 energy -0.57 abandoned number of hydrogen bonds is 69 side chain atoms swapped for PHE 3 PHE 18 TYR 93 * NMR ensemble comprises 18 model structures * Program completed