Running PDBSTAT from Linux 
  Ayuda is on: /farm/software/PdbStat/PdbStat-5.7

  (C)
  (C)  Pdbstat -- A program to evaluate some statistics of macromolecules,
  (C)             given the cartesian coordinates.
  (C)
  (C)  (c) Copyright 1992-2012 Roberto Tejero and Gaetano T. Montelione
  (C)      Center for Advanced Technology and Medicine (CABM)
  (C)      Rutgers University
  (C)
       ** VERSION:  5.7-exp dom mar 10 23:17:04 UTC 2013  ** 
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
       ===============>  W E L C O M E  to PDBStat <================   
 PDBStat has become a tool able (between other things) of:
    a) read and interconvert between DISMAN, DYANA, PDB, DISCOVER, IMPACT 
    b) elaborate some info about the molecule as MW, Radius of gyration, .. 
    c) investigate the setereochemical quality of a protein by evaluating 
       phi, psi, chi1, impropers and chirality 
 The sequence of acts should be: 
       1.- read a file (coords, constr) 
       2.- read a sequence file (can be free format) 
       3.- Follow menu (calculating, writing ...) 

   NOTE: Be aware that if you read in a constraint file you 
         *ALWAYS* need to read a sequence file also

 HAVE FUN AND ENJOY !!
 **** For more info type `help' or `menu' **** 

  --> ... Reading/Loading Distances file  ...  125 distance records read
  --> ... Reading/Loading Dihedral Library .. 1119 library records read

PdbStat> [rea]d [hel]p [his]tory [men]u [phi] [qui]t...

PdbStat>  leyendo PDB 
  > locate_file(): file `temp_bcm_111.pdb' opened for reading 
  > ReadCoordsPdb(): >> HEADER    STRUCTURAL GENOMICS, UNKNOWN FUNCTION   18-MAY-07   2Q00              
  > ReadCoordsPdb(): >> TITLE     CRYSTAL STRUCTURE OF THE P95883_SULSO PROTEIN FROM                    
  > ReadCoordsPdb(): >> TITLE    2 SULFOLOBUS SOLFATARICUS. NESG TARGET SSR10.                          
  > ReadCoordsPdb(): >> COMPND    MOL_ID: 1;                                                            
  > ReadCoordsPdb(): >> COMPND   2 MOLECULE: ORF C02003 PROTEIN;                                        
   1  > ReadCoordsPdb(): After scanning there is(are) 1 model(s) 

  > ReadCoordsPdb(): *** SUMMARY ***
  > ReadCoordsPdb(): -->  1913 ATOM records read from file 
  > ReadCoordsPdb(): -->  1913 Regular IUPAC Atoms 
  > ReadCoordsPdb(): -->     0 Pseudo-atoms (DISMAN type) 
  > ReadCoordsPdb(): -->     0 Lone pairs
  > ReadCoordsPdb(): Bye ... 
  > =============================== INFO ================================ 
  > INFO_mol: # atoms:     1913 (1230 C, 0 H, 368 O, 313 N, 2 S, 0 Q, 0 Metals)
  > INFO_mol: # residues:     242 (Avg. mol. weight: 103.8)
  > INFO_mol: # -- M.W. : 25108.8 g/mol. (25.11 kD)     Estimated RoG <S2>:  17.71 
  > INFO_mol: CenterMass() -- Working PDB model 1 in file, model no. 1 
  > INFO_mol: CenterMass() -- Molecule `temp_bcm_111.pdb' model #1, TOTAL RESIDUES: 242
  > INFO_mol: Radius of Gyration <S2> :    18.9184  angstroms 
  > INFO_mol: Center of Masses: x_cm(47.203), y_cm(22.107), z_cm(76.849) 

  > INFO_res:  SISTSAEVYY EEAEEFLSKG DLVQACEKYY KAAEEAIKLL VIENNLKEIT 
  > INFO_res:  NNVKGRWKSE NLFKASKLLR SNNTEIPILW KSAWTLHVEG FHELSLNEKE 
  > INFO_res:  VKKLKEDVRK LVIFAVNSLE ISTSAEVYYE EAEEFLSKGD LVQACEKYYK 
  > INFO_res:  AAEEAIKLLV IENNLKEITN NVKNKGRWKS ENLFKASKLL RSNNTEIPIL 
  > INFO_res:  WKSAWTLHVE GFHELSLNEK EVKKLKEDVR KLVIFAVNSL EH
  > INFO_res:  
  > INFO_res:  SER  ILE  SER  THR  SER  ALA  GLU  VAL  TYR  TYR  GLU  GLU  
  > INFO_res:  ALA  GLU  GLU  PHE  LEU  SER  LYS  GLY  ASP  LEU  VAL  GLN  
  > INFO_res:  ALA  CYS  GLU  LYS  TYR  TYR  LYS  ALA  ALA  GLU  GLU  ALA  
  > INFO_res:  ILE  LYS  LEU  LEU  VAL  ILE  GLU  ASN  ASN  LEU  LYS  GLU  
  > INFO_res:  ILE  THR  ASN  ASN  VAL  LYS  GLY  ARG  TRP  LYS  SER  GLU  
  > INFO_res:  ASN  LEU  PHE  LYS  ALA  SER  LYS  LEU  LEU  ARG  SER  ASN  
  > INFO_res:  ASN  THR  GLU  ILE  PRO  ILE  LEU  TRP  LYS  SER  ALA  TRP  
  > INFO_res:  THR  LEU  HIS  VAL  GLU  GLY  PHE  HIS  GLU  LEU  SER  LEU  
  > INFO_res:  ASN  GLU  LYS  GLU  VAL  LYS  LYS  LEU  LYS  GLU  ASP  VAL  
  > INFO_res:  ARG  LYS  LEU  VAL  ILE  PHE  ALA  VAL  ASN  SER  LEU  GLU  
  > INFO_res:  ILE  SER  THR  SER  ALA  GLU  VAL  TYR  TYR  GLU  GLU  ALA  
  > INFO_res:  GLU  GLU  PHE  LEU  SER  LYS  GLY  ASP  LEU  VAL  GLN  ALA  
  > INFO_res:  CYS  GLU  LYS  TYR  TYR  LYS  ALA  ALA  GLU  GLU  ALA  ILE  
  > INFO_res:  LYS  LEU  LEU  VAL  ILE  GLU  ASN  ASN  LEU  LYS  GLU  ILE  
  > INFO_res:  THR  ASN  ASN  VAL  LYS  ASN  LYS  GLY  ARG  TRP  LYS  SER  
  > INFO_res:  GLU  ASN  LEU  PHE  LYS  ALA  SER  LYS  LEU  LEU  ARG  SER  
  > INFO_res:  ASN  ASN  THR  GLU  ILE  PRO  ILE  LEU  TRP  LYS  SER  ALA  
  > INFO_res:  TRP  THR  LEU  HIS  VAL  GLU  GLY  PHE  HIS  GLU  LEU  SER  
  > INFO_res:  LEU  ASN  GLU  LYS  GLU  VAL  LYS  LYS  LEU  LYS  GLU  ASP  
  > INFO_res:  VAL  ARG  LYS  LEU  VAL  ILE  PHE  ALA  VAL  ASN  SER  LEU  
  > INFO_res:  GLU  HIS  
  > INFO_res:  
  > INFO_res:  18 ALA     6 ARG    19 ASN     4 ASP     2 CYS     2 GLN  
  > INFO_res:  36 GLU     6 GLY     5 HIS    14 ILE    30 LEU    31 LYS  
  > INFO_res:   8 PHE     2 PRO    19 SER     8 THR     8 TYR     6 TRP  
  > INFO_res:  18 VAL  
  > INFO_res: DISULFIDE: ** NO INFO FOR DISULFIDES IN FILE 
  > ===================================================================== 
  > ReadCoordsPdb():  *** x-mer, 2 [2] chains 


PdbStat> PdbStat>  ** Model with _NO_ hydrogens, nothing to fix

PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER: ... backbone, heavy, full set? (back/heavy/all/select):   > COORD_writer: Format  (pdb/congen/RasMol) ? :   > COORD_writer: * ---- Wrong typing BUDDY !! ----- *
  > COORD_writer: * Option NOT recognized, type again please *
  > COORD_writer: Format  (pdb/congen/RasMol) ? : 
PdbStat> PdbStat>  ** Model with _NO_ hydrogens, nothing to fix

PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER: ... backbone, heavy, full set? (back/heavy/all/select):   > COORD_writer: Format  (pdb/congen/RasMol) ? :   > COORD_writer: * ---- Wrong typing BUDDY !! ----- *
  > COORD_writer: * Option NOT recognized, type again please *
  > COORD_writer: Format  (pdb/congen/RasMol) ? : 
PdbStat> 
PdbStat>  *END* of program detected, BYE! ...