PyMOL>load ./SSR10_NMR_em_bcr3.pdb.iupac
HEADER    STRUCTURAL GENOMICS                     23-MAY-07   2JPU
TITLE     SOLUTION STRUCTURE OF NESG TARGET SSR10, ORF C02003 PROTEIN
COMPND    MOL_ID: 1;
COMPND   2 MOLECULE: ORF C02003 PROTEIN;
COMPND   3 CHAIN: A;
COMPND   4 SYNONYM: HYPOTHETICAL PROTEIN;
COMPND   5 ENGINEERED: YES
 ObjectMolecule: Read secondary structure assignments.
 ObjectMolReadPDBStr: read MODEL 1
 ObjectMolReadPDBStr: read MODEL 2
 ObjectMolReadPDBStr: read MODEL 3
 ObjectMolReadPDBStr: read MODEL 4
 ObjectMolReadPDBStr: read MODEL 5
 ObjectMolReadPDBStr: read MODEL 6
 ObjectMolReadPDBStr: read MODEL 7
 ObjectMolReadPDBStr: read MODEL 8
 ObjectMolReadPDBStr: read MODEL 9
 ObjectMolReadPDBStr: read MODEL 10
 ObjectMolReadPDBStr: read MODEL 11
 ObjectMolReadPDBStr: read MODEL 12
 ObjectMolReadPDBStr: read MODEL 13
 ObjectMolReadPDBStr: read MODEL 14
 ObjectMolReadPDBStr: read MODEL 15
 ObjectMolReadPDBStr: read MODEL 16
 ObjectMolReadPDBStr: read MODEL 17
 ObjectMolReadPDBStr: read MODEL 18
 ObjectMolReadPDBStr: read MODEL 19
 ObjectMolReadPDBStr: read MODEL 20
 CmdLoad: "./SSR10_NMR_em_bcr3.pdb.iupac" loaded as "SSR10_NMR_em_bcr3.pdb.iupac".
PyMOL>hide everything, all
PyMOL>dss
PyMOL>set stick_transparency,0.6
 Setting: stick_transparency set to 0.60000.
PyMOL>set cartoon_transparency,0.5
 Setting: cartoon_transparency set to 0.50000.
PyMOL>show cartoon, all
PyMOL>set bg_rgb, [1,1,1]
 Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ].
PyMOL>color blue, all
 Executive: Colored 2139 atoms and 1 object.
PyMOL>set label_color,black
 Setting: label_color set to black.
PyMOL>set label_font_id, 4
 Setting: label_font_id set to 4.
PyMOL>set label_size,3
 Setting: label_size set to 3.00000.
PyMOL>set_color color6, [0, 123, 255]
 Color: "color6" defined as [ 0.000, 0.482, 1.000 ].
PyMOL>color color6, resi 6
 Executive: Colored 11 atoms.
PyMOL>set_color color10, [0, 255, 42]
 Color: "color10" defined as [ 0.000, 1.000, 0.165 ].
PyMOL>color color10, resi 10
 Executive: Colored 21 atoms.
PyMOL>set_color color11, [0, 72, 255]
 Color: "color11" defined as [ 0.000, 0.282, 1.000 ].
PyMOL>color color11, resi 11
 Executive: Colored 21 atoms.
PyMOL>set_color color13, [0, 161, 255]
 Color: "color13" defined as [ 0.000, 0.631, 1.000 ].
PyMOL>color color13, resi 13
 Executive: Colored 15 atoms.
PyMOL>set_color color14, [3, 255, 0]
 Color: "color14" defined as [ 0.012, 1.000, 0.000 ].
PyMOL>color color14, resi 14
 Executive: Colored 10 atoms.
PyMOL>set_color color17, [0, 255, 31]
 Color: "color17" defined as [ 0.000, 1.000, 0.122 ].
PyMOL>color color17, resi 17
 Executive: Colored 20 atoms.
PyMOL>set_color color20, [0, 33, 255]
 Color: "color20" defined as [ 0.000, 0.129, 1.000 ].
PyMOL>color color20, resi 20
 Executive: Colored 22 atoms.
PyMOL>set_color color22, [0, 123, 255]
 Color: "color22" defined as [ 0.000, 0.482, 1.000 ].
PyMOL>color color22, resi 22
 Executive: Colored 12 atoms.
PyMOL>set_color color25, [0, 90, 255]
 Color: "color25" defined as [ 0.000, 0.353, 1.000 ].
PyMOL>color color25, resi 25
 Executive: Colored 17 atoms.
PyMOL>set_color color27, [0, 220, 255]
 Color: "color27" defined as [ 0.000, 0.863, 1.000 ].
PyMOL>color color27, resi 27
 Executive: Colored 11 atoms.
PyMOL>set_color color29, [75, 255, 0]
 Color: "color29" defined as [ 0.294, 1.000, 0.000 ].
PyMOL>color color29, resi 29
 Executive: Colored 22 atoms.
PyMOL>set_color color30, [207, 255, 0]
 Color: "color30" defined as [ 0.812, 1.000, 0.000 ].
PyMOL>color color30, resi 30
 Executive: Colored 21 atoms.
PyMOL>set_color color31, [0, 113, 255]
 Color: "color31" defined as [ 0.000, 0.443, 1.000 ].
PyMOL>color color31, resi 31
 Executive: Colored 21 atoms.
PyMOL>set_color color32, [0, 60, 255]
 Color: "color32" defined as [ 0.000, 0.235, 1.000 ].
PyMOL>color color32, resi 32
 Executive: Colored 22 atoms.
PyMOL>set_color color34, [125, 255, 0]
 Color: "color34" defined as [ 0.490, 1.000, 0.000 ].
PyMOL>color color34, resi 34
 Executive: Colored 10 atoms.
PyMOL>set_color color35, [255, 121, 0]
 Color: "color35" defined as [ 1.000, 0.475, 0.000 ].
PyMOL>color color35, resi 35
 Executive: Colored 15 atoms.
PyMOL>show sticks, res 35
PyMOL>set_color color36, [0, 255, 227]
 Color: "color36" defined as [ 0.000, 1.000, 0.890 ].
PyMOL>color color36, resi 36
 Executive: Colored 15 atoms.
PyMOL>set_color color37, [0, 111, 255]
 Color: "color37" defined as [ 0.000, 0.435, 1.000 ].
PyMOL>color color37, resi 37
 Executive: Colored 10 atoms.
PyMOL>set_color color38, [255, 251, 0]
 Color: "color38" defined as [ 1.000, 0.984, 0.000 ].
PyMOL>color color38, resi 38
 Executive: Colored 19 atoms.
PyMOL>show sticks, res 38
PyMOL>set_color color39, [0, 255, 101]
 Color: "color39" defined as [ 0.000, 1.000, 0.396 ].
PyMOL>color color39, resi 39
 Executive: Colored 22 atoms.
PyMOL>set_color color41, [0, 97, 255]
 Color: "color41" defined as [ 0.000, 0.380, 1.000 ].
PyMOL>color color41, resi 41
 Executive: Colored 19 atoms.
PyMOL>set_color color42, [0, 117, 255]
 Color: "color42" defined as [ 0.000, 0.459, 1.000 ].
PyMOL>color color42, resi 42
 Executive: Colored 16 atoms.
PyMOL>set_color color43, [0, 3, 255]
 Color: "color43" defined as [ 0.000, 0.012, 1.000 ].
PyMOL>color color43, resi 43
 Executive: Colored 19 atoms.
PyMOL>set_color color45, [0, 51, 255]
 Color: "color45" defined as [ 0.000, 0.200, 1.000 ].
PyMOL>color color45, resi 45
 Executive: Colored 14 atoms.
PyMOL>set_color color47, [0, 129, 255]
 Color: "color47" defined as [ 0.000, 0.506, 1.000 ].
PyMOL>color color47, resi 47
 Executive: Colored 19 atoms.
PyMOL>set_color color50, [3, 255, 0]
 Color: "color50" defined as [ 0.012, 1.000, 0.000 ].
PyMOL>color color50, resi 50
 Executive: Colored 19 atoms.
PyMOL>set_color color52, [0, 134, 255]
 Color: "color52" defined as [ 0.000, 0.525, 1.000 ].
PyMOL>color color52, resi 52
 Executive: Colored 14 atoms.
PyMOL>set_color color54, [0, 255, 188]
 Color: "color54" defined as [ 0.000, 1.000, 0.737 ].
PyMOL>color color54, resi 54
 Executive: Colored 16 atoms.
PyMOL>set_color color55, [0, 66, 255]
 Color: "color55" defined as [ 0.000, 0.259, 1.000 ].
PyMOL>color color55, resi 55
 Executive: Colored 22 atoms.
PyMOL>set_color color59, [0, 27, 255]
 Color: "color59" defined as [ 0.000, 0.106, 1.000 ].
PyMOL>color color59, resi 59
 Executive: Colored 24 atoms.
PyMOL>set_color color60, [255, 213, 0]
 Color: "color60" defined as [ 1.000, 0.835, 0.000 ].
PyMOL>color color60, resi 60
 Executive: Colored 24 atoms.
PyMOL>show sticks, res 60
PyMOL>set_color color62, [0, 19, 255]
 Color: "color62" defined as [ 0.000, 0.075, 1.000 ].
PyMOL>color color62, resi 62
 Executive: Colored 11 atoms.
PyMOL>set_color color64, [0, 255, 89]
 Color: "color64" defined as [ 0.000, 1.000, 0.349 ].
PyMOL>color color64, resi 64
 Executive: Colored 14 atoms.
PyMOL>set_color color65, [255, 74, 0]
 Color: "color65" defined as [ 1.000, 0.290, 0.000 ].
PyMOL>color color65, resi 65
 Executive: Colored 19 atoms.
PyMOL>show sticks, res 65
PyMOL>set_color color66, [0, 255, 210]
 Color: "color66" defined as [ 0.000, 1.000, 0.824 ].
PyMOL>color color66, resi 66
 Executive: Colored 20 atoms.
PyMOL>set_color color68, [0, 255, 193]
 Color: "color68" defined as [ 0.000, 1.000, 0.757 ].
PyMOL>color color68, resi 68
 Executive: Colored 10 atoms.
PyMOL>set_color color69, [0, 46, 255]
 Color: "color69" defined as [ 0.000, 0.180, 1.000 ].
PyMOL>color color69, resi 69
 Executive: Colored 11 atoms.
PyMOL>set_color color73, [0, 51, 255]
 Color: "color73" defined as [ 0.000, 0.200, 1.000 ].
PyMOL>color color73, resi 73
 Executive: Colored 24 atoms.
PyMOL>set_color color75, [0, 14, 255]
 Color: "color75" defined as [ 0.000, 0.055, 1.000 ].
PyMOL>color color75, resi 75
 Executive: Colored 14 atoms.
PyMOL>set_color color76, [0, 102, 255]
 Color: "color76" defined as [ 0.000, 0.400, 1.000 ].
PyMOL>color color76, resi 76
 Executive: Colored 14 atoms.
PyMOL>set_color color77, [0, 62, 255]
 Color: "color77" defined as [ 0.000, 0.243, 1.000 ].
PyMOL>color color77, resi 77
 Executive: Colored 14 atoms.
PyMOL>set_color color79, [22, 255, 0]
 Color: "color79" defined as [ 0.086, 1.000, 0.000 ].
PyMOL>color color79, resi 79
 Executive: Colored 19 atoms.
PyMOL>set_color color80, [88, 255, 0]
 Color: "color80" defined as [ 0.345, 1.000, 0.000 ].
PyMOL>color color80, resi 80
 Executive: Colored 14 atoms.
PyMOL>set_color color82, [0, 14, 255]
 Color: "color82" defined as [ 0.000, 0.055, 1.000 ].
PyMOL>color color82, resi 82
 Executive: Colored 19 atoms.
PyMOL>set_color color83, [255, 0, 0]
 Color: "color83" defined as [ 1.000, 0.000, 0.000 ].
PyMOL>color color83, resi 83
 Executive: Colored 24 atoms.
PyMOL>show sticks, res 83
PyMOL>set_color color84, [0, 255, 59]
 Color: "color84" defined as [ 0.000, 1.000, 0.231 ].
PyMOL>color color84, resi 84
 Executive: Colored 22 atoms.
PyMOL>set_color color86, [158, 255, 0]
 Color: "color86" defined as [ 0.620, 1.000, 0.000 ].
PyMOL>color color86, resi 86
 Executive: Colored 10 atoms.
PyMOL>set_color color87, [41, 255, 0]
 Color: "color87" defined as [ 0.161, 1.000, 0.000 ].
PyMOL>color color87, resi 87
 Executive: Colored 24 atoms.
PyMOL>set_color color89, [73, 255, 0]
 Color: "color89" defined as [ 0.286, 1.000, 0.000 ].
PyMOL>color color89, resi 89
 Executive: Colored 19 atoms.
PyMOL>set_color color91, [0, 92, 255]
 Color: "color91" defined as [ 0.000, 0.361, 1.000 ].
PyMOL>color color91, resi 91
 Executive: Colored 16 atoms.
PyMOL>set_color color100, [0, 18, 255]
 Color: "color100" defined as [ 0.000, 0.071, 1.000 ].
PyMOL>color color100, resi 100
 Executive: Colored 14 atoms.
PyMOL>set_color color103, [0, 7, 255]
 Color: "color103" defined as [ 0.000, 0.027, 1.000 ].
PyMOL>color color103, resi 103
 Executive: Colored 15 atoms.
PyMOL>set_color color107, [50, 255, 0]
 Color: "color107" defined as [ 0.196, 1.000, 0.000 ].
PyMOL>color color107, resi 107
 Executive: Colored 19 atoms.
PyMOL>set_color color108, [0, 77, 255]
 Color: "color108" defined as [ 0.000, 0.302, 1.000 ].
PyMOL>color color108, resi 108
 Executive: Colored 22 atoms.
PyMOL>set_color color111, [0, 255, 204]
 Color: "color111" defined as [ 0.000, 1.000, 0.800 ].
PyMOL>color color111, resi 111
 Executive: Colored 16 atoms.
PyMOL>set_color color112, [0, 41, 255]
 Color: "color112" defined as [ 0.000, 0.161, 1.000 ].
PyMOL>color color112, resi 112
 Executive: Colored 24 atoms.
PyMOL>set_color color114, [0, 174, 255]
 Color: "color114" defined as [ 0.000, 0.682, 1.000 ].
PyMOL>color color114, resi 114
 Executive: Colored 19 atoms.
PyMOL>set_color color116, [0, 169, 255]
 Color: "color116" defined as [ 0.000, 0.663, 1.000 ].
PyMOL>color color116, resi 116
 Executive: Colored 19 atoms.
PyMOL>set_color color117, [0, 248, 255]
 Color: "color117" defined as [ 0.000, 0.973, 1.000 ].
PyMOL>color color117, resi 117
 Executive: Colored 20 atoms.
PyMOL>set_color color120, [0, 25, 255]
 Color: "color120" defined as [ 0.000, 0.098, 1.000 ].
PyMOL>color color120, resi 120
 Executive: Colored 14 atoms.
PyMOL>label 35/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 38/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 60/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 65/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 83/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>orient
PyMOL>ray 800,800
 Ray: render time: 1.19 sec. = 3028.5 frames/hour (1.19 sec. accum.).
PyMOL>png precision.png
 ScenePNG: wrote 800x800 pixel image to file "precision.png".
PyMOL>quit