read coor pdb SR478_R3_em_bcr3.pdb
all
rmsd coor heavy 7M-19M,24M-43M,47M-69M,97M-109M,114M-133M,137M-159M
ave
resOrd_rmsd_heavy
rmsd coor backbone 7M-19M,24M-43M,47M-69M,97M-109M,114M-133M,137M-159M
ave
resOrd_rmsd_bb
write
best.pdb
coor
all
all
pdb
quit