PyMOL>load ./SR478_R3Cons_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./SR478_R3Cons_em_bcr3.pdb.iupac" loaded as "SR478_R3Cons_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 2672 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color7, [0, 97, 255] Color: "color7" defined as [ 0.000, 0.380, 1.000 ]. PyMOL>color color7, resi 7 Executive: Colored 32 atoms. PyMOL>set_color color9, [0, 80, 255] Color: "color9" defined as [ 0.000, 0.314, 1.000 ]. PyMOL>color color9, resi 9 Executive: Colored 42 atoms. PyMOL>set_color color10, [0, 138, 255] Color: "color10" defined as [ 0.000, 0.541, 1.000 ]. PyMOL>color color10, resi 10 Executive: Colored 40 atoms. PyMOL>set_color color11, [148, 255, 0] Color: "color11" defined as [ 0.580, 1.000, 0.000 ]. PyMOL>color color11, resi 11 Executive: Colored 38 atoms. PyMOL>set_color color14, [0, 124, 255] Color: "color14" defined as [ 0.000, 0.486, 1.000 ]. PyMOL>color color14, resi 14 Executive: Colored 38 atoms. PyMOL>set_color color16, [0, 26, 255] Color: "color16" defined as [ 0.000, 0.102, 1.000 ]. PyMOL>color color16, resi 16 Executive: Colored 34 atoms. PyMOL>set_color color17, [255, 152, 0] Color: "color17" defined as [ 1.000, 0.596, 0.000 ]. PyMOL>color color17, resi 17 Executive: Colored 34 atoms. PyMOL>show sticks, res 17 PyMOL>set_color color18, [255, 178, 0] Color: "color18" defined as [ 1.000, 0.698, 0.000 ]. PyMOL>color color18, resi 18 Executive: Colored 38 atoms. PyMOL>show sticks, res 18 PyMOL>set_color color20, [0, 68, 255] Color: "color20" defined as [ 0.000, 0.267, 1.000 ]. PyMOL>color color20, resi 20 Executive: Colored 34 atoms. PyMOL>set_color color24, [255, 122, 0] Color: "color24" defined as [ 1.000, 0.478, 0.000 ]. PyMOL>color color24, resi 24 Executive: Colored 30 atoms. PyMOL>show sticks, res 24 PyMOL>set_color color26, [255, 233, 0] Color: "color26" defined as [ 1.000, 0.914, 0.000 ]. PyMOL>color color26, resi 26 Executive: Colored 44 atoms. PyMOL>show sticks, res 26 PyMOL>set_color color27, [0, 40, 255] Color: "color27" defined as [ 0.000, 0.157, 1.000 ]. PyMOL>color color27, resi 27 Executive: Colored 38 atoms. PyMOL>set_color color29, [158, 255, 0] Color: "color29" defined as [ 0.620, 1.000, 0.000 ]. PyMOL>color color29, resi 29 Executive: Colored 20 atoms. PyMOL>set_color color30, [0, 117, 255] Color: "color30" defined as [ 0.000, 0.459, 1.000 ]. PyMOL>color color30, resi 30 Executive: Colored 34 atoms. PyMOL>set_color color34, [0, 255, 194] Color: "color34" defined as [ 0.000, 1.000, 0.761 ]. PyMOL>color color34, resi 34 Executive: Colored 42 atoms. PyMOL>set_color color38, [82, 255, 0] Color: "color38" defined as [ 0.322, 1.000, 0.000 ]. PyMOL>color color38, resi 38 Executive: Colored 32 atoms. PyMOL>set_color color40, [0, 90, 255] Color: "color40" defined as [ 0.000, 0.353, 1.000 ]. PyMOL>color color40, resi 40 Executive: Colored 28 atoms. PyMOL>set_color color41, [113, 255, 0] Color: "color41" defined as [ 0.443, 1.000, 0.000 ]. PyMOL>color color41, resi 41 Executive: Colored 38 atoms. PyMOL>set_color color42, [0, 31, 255] Color: "color42" defined as [ 0.000, 0.122, 1.000 ]. PyMOL>color color42, resi 42 Executive: Colored 32 atoms. PyMOL>set_color color47, [0, 53, 255] Color: "color47" defined as [ 0.000, 0.208, 1.000 ]. PyMOL>color color47, resi 47 Executive: Colored 28 atoms. PyMOL>set_color color51, [0, 22, 255] Color: "color51" defined as [ 0.000, 0.086, 1.000 ]. PyMOL>color color51, resi 51 Executive: Colored 32 atoms. PyMOL>set_color color52, [0, 93, 255] Color: "color52" defined as [ 0.000, 0.365, 1.000 ]. PyMOL>color color52, resi 52 Executive: Colored 32 atoms. PyMOL>set_color color53, [58, 255, 0] Color: "color53" defined as [ 0.227, 1.000, 0.000 ]. PyMOL>color color53, resi 53 Executive: Colored 38 atoms. PyMOL>set_color color56, [255, 193, 0] Color: "color56" defined as [ 1.000, 0.757, 0.000 ]. PyMOL>color color56, resi 56 Executive: Colored 38 atoms. PyMOL>show sticks, res 56 PyMOL>set_color color57, [0, 2, 255] Color: "color57" defined as [ 0.000, 0.008, 1.000 ]. PyMOL>color color57, resi 57 Executive: Colored 34 atoms. PyMOL>set_color color59, [0, 255, 29] Color: "color59" defined as [ 0.000, 1.000, 0.114 ]. PyMOL>color color59, resi 59 Executive: Colored 38 atoms. PyMOL>set_color color60, [0, 162, 255] Color: "color60" defined as [ 0.000, 0.635, 1.000 ]. PyMOL>color color60, resi 60 Executive: Colored 24 atoms. PyMOL>set_color color61, [0, 22, 255] Color: "color61" defined as [ 0.000, 0.086, 1.000 ]. PyMOL>color color61, resi 61 Executive: Colored 30 atoms. PyMOL>set_color color62, [171, 255, 0] Color: "color62" defined as [ 0.671, 1.000, 0.000 ]. PyMOL>color color62, resi 62 Executive: Colored 20 atoms. PyMOL>set_color color63, [0, 255, 255] Color: "color63" defined as [ 0.000, 1.000, 1.000 ]. PyMOL>color color63, resi 63 Executive: Colored 42 atoms. PyMOL>set_color color64, [0, 112, 255] Color: "color64" defined as [ 0.000, 0.439, 1.000 ]. PyMOL>color color64, resi 64 Executive: Colored 28 atoms. PyMOL>set_color color66, [0, 166, 255] Color: "color66" defined as [ 0.000, 0.651, 1.000 ]. PyMOL>color color66, resi 66 Executive: Colored 32 atoms. PyMOL>set_color color67, [0, 200, 255] Color: "color67" defined as [ 0.000, 0.784, 1.000 ]. PyMOL>color color67, resi 67 Executive: Colored 44 atoms. PyMOL>set_color color70, [0, 227, 255] Color: "color70" defined as [ 0.000, 0.890, 1.000 ]. PyMOL>color color70, resi 70 Executive: Colored 30 atoms. PyMOL>label 17/ca,"%s" %(resi) Label: labelled 2 atoms. PyMOL>label 18/ca,"%s" %(resi) Label: labelled 2 atoms. PyMOL>label 24/ca,"%s" %(resi) Label: labelled 2 atoms. PyMOL>label 26/ca,"%s" %(resi) Label: labelled 2 atoms. PyMOL>label 56/ca,"%s" %(resi) Label: labelled 2 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 0.90 sec. = 4015.5 frames/hour (0.90 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit