PyMOL>load ./SR478_NMR_em_bcr3.pdb.iupac
HEADER    STRUCTURAL GENOMICS, UNKNOWN FUNCTION   29-JUN-07   2JS1
TITLE     SOLUTION NMR STRUCTURE OF THE HOMODIMER PROTEIN YVFG FROM
TITLE    2 BACILLUS SUBTILIS, NORTHEAST STRUCTURAL GENOMICS
TITLE    3 CONSORTIUM TARGET SR478
COMPND    MOL_ID: 1;
COMPND   2 MOLECULE: UNCHARACTERIZED PROTEIN YVFG;
COMPND   3 CHAIN: A, B;
COMPND   4 ENGINEERED: YES
 ObjectMolecule: Read secondary structure assignments.
 ObjectMolReadPDBStr: read MODEL 1
 ObjectMolReadPDBStr: read MODEL 2
 ObjectMolReadPDBStr: read MODEL 3
 ObjectMolReadPDBStr: read MODEL 4
 ObjectMolReadPDBStr: read MODEL 5
 ObjectMolReadPDBStr: read MODEL 6
 ObjectMolReadPDBStr: read MODEL 7
 ObjectMolReadPDBStr: read MODEL 8
 ObjectMolReadPDBStr: read MODEL 9
 ObjectMolReadPDBStr: read MODEL 10
 ObjectMolReadPDBStr: read MODEL 11
 ObjectMolReadPDBStr: read MODEL 12
 ObjectMolReadPDBStr: read MODEL 13
 ObjectMolReadPDBStr: read MODEL 14
 ObjectMolReadPDBStr: read MODEL 15
 ObjectMolReadPDBStr: read MODEL 16
 ObjectMolReadPDBStr: read MODEL 17
 ObjectMolReadPDBStr: read MODEL 18
 ObjectMolReadPDBStr: read MODEL 19
 ObjectMolReadPDBStr: read MODEL 20
 CmdLoad: "./SR478_NMR_em_bcr3.pdb.iupac" loaded as "SR478_NMR_em_bcr3.pdb.iupac".
PyMOL>hide everything, all
PyMOL>dss
PyMOL>set stick_transparency,0.6
 Setting: stick_transparency set to 0.60000.
PyMOL>set cartoon_transparency,0.5
 Setting: cartoon_transparency set to 0.50000.
PyMOL>show cartoon, all
PyMOL>set bg_rgb, [1,1,1]
 Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ].
PyMOL>color blue, all
 Executive: Colored 2676 atoms and 1 object.
PyMOL>set label_color,black
 Setting: label_color set to black.
PyMOL>set label_font_id, 4
 Setting: label_font_id set to 4.
PyMOL>set label_size,3
 Setting: label_size set to 3.00000.
PyMOL>set_color color11, [255, 243, 0]
 Color: "color11" defined as [ 1.000, 0.953, 0.000 ].
PyMOL>color color11, resi 11
 Executive: Colored 38 atoms.
PyMOL>show sticks, res 11
PyMOL>set_color color14, [0, 108, 255]
 Color: "color14" defined as [ 0.000, 0.424, 1.000 ].
PyMOL>color color14, resi 14
 Executive: Colored 38 atoms.
PyMOL>set_color color16, [0, 28, 255]
 Color: "color16" defined as [ 0.000, 0.110, 1.000 ].
PyMOL>color color16, resi 16
 Executive: Colored 34 atoms.
PyMOL>set_color color17, [0, 255, 193]
 Color: "color17" defined as [ 0.000, 1.000, 0.757 ].
PyMOL>color color17, resi 17
 Executive: Colored 36 atoms.
PyMOL>set_color color18, [0, 160, 255]
 Color: "color18" defined as [ 0.000, 0.627, 1.000 ].
PyMOL>color color18, resi 18
 Executive: Colored 38 atoms.
PyMOL>set_color color20, [0, 51, 255]
 Color: "color20" defined as [ 0.000, 0.200, 1.000 ].
PyMOL>color color20, resi 20
 Executive: Colored 34 atoms.
PyMOL>set_color color24, [0, 255, 52]
 Color: "color24" defined as [ 0.000, 1.000, 0.204 ].
PyMOL>color color24, resi 24
 Executive: Colored 30 atoms.
PyMOL>set_color color26, [0, 103, 255]
 Color: "color26" defined as [ 0.000, 0.404, 1.000 ].
PyMOL>color color26, resi 26
 Executive: Colored 44 atoms.
PyMOL>set_color color29, [0, 255, 81]
 Color: "color29" defined as [ 0.000, 1.000, 0.318 ].
PyMOL>color color29, resi 29
 Executive: Colored 20 atoms.
PyMOL>set_color color34, [0, 255, 245]
 Color: "color34" defined as [ 0.000, 1.000, 0.961 ].
PyMOL>color color34, resi 34
 Executive: Colored 42 atoms.
PyMOL>set_color color35, [0, 21, 255]
 Color: "color35" defined as [ 0.000, 0.082, 1.000 ].
PyMOL>color color35, resi 35
 Executive: Colored 48 atoms.
PyMOL>set_color color38, [0, 255, 79]
 Color: "color38" defined as [ 0.000, 1.000, 0.310 ].
PyMOL>color color38, resi 38
 Executive: Colored 32 atoms.
PyMOL>set_color color41, [0, 255, 242]
 Color: "color41" defined as [ 0.000, 1.000, 0.949 ].
PyMOL>color color41, resi 41
 Executive: Colored 38 atoms.
PyMOL>set_color color53, [0, 77, 255]
 Color: "color53" defined as [ 0.000, 0.302, 1.000 ].
PyMOL>color color53, resi 53
 Executive: Colored 38 atoms.
PyMOL>set_color color56, [0, 255, 247]
 Color: "color56" defined as [ 0.000, 1.000, 0.969 ].
PyMOL>color color56, resi 56
 Executive: Colored 38 atoms.
PyMOL>set_color color59, [0, 255, 248]
 Color: "color59" defined as [ 0.000, 1.000, 0.973 ].
PyMOL>color color59, resi 59
 Executive: Colored 38 atoms.
PyMOL>set_color color61, [0, 33, 255]
 Color: "color61" defined as [ 0.000, 0.129, 1.000 ].
PyMOL>color color61, resi 61
 Executive: Colored 30 atoms.
PyMOL>set_color color62, [196, 255, 0]
 Color: "color62" defined as [ 0.769, 1.000, 0.000 ].
PyMOL>color color62, resi 62
 Executive: Colored 20 atoms.
PyMOL>set_color color63, [0, 14, 255]
 Color: "color63" defined as [ 0.000, 0.055, 1.000 ].
PyMOL>color color63, resi 63
 Executive: Colored 42 atoms.
PyMOL>set_color color65, [0, 59, 255]
 Color: "color65" defined as [ 0.000, 0.231, 1.000 ].
PyMOL>color color65, resi 65
 Executive: Colored 44 atoms.
PyMOL>label 11/ca,"%s" %(resi)
 Label: labelled 2 atoms.
PyMOL>orient
PyMOL>ray 800,800
 Ray: render time: 1.11 sec. = 3239.0 frames/hour (1.11 sec. accum.).
PyMOL>png precision.png
 ScenePNG: wrote 800x800 pixel image to file "precision.png".
PyMOL>quit