PyMOL>load ./SR213_R3_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./SR213_R3_em_bcr3.pdb.iupac" loaded as "SR213_R3_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 2032 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color6, [0, 224, 255] Color: "color6" defined as [ 0.000, 0.878, 1.000 ]. PyMOL>color color6, resi 6 Executive: Colored 19 atoms. PyMOL>set_color color9, [137, 255, 0] Color: "color9" defined as [ 0.537, 1.000, 0.000 ]. PyMOL>color color9, resi 9 Executive: Colored 17 atoms. PyMOL>set_color color10, [0, 255, 135] Color: "color10" defined as [ 0.000, 1.000, 0.529 ]. PyMOL>color color10, resi 10 Executive: Colored 14 atoms. PyMOL>set_color color13, [255, 147, 0] Color: "color13" defined as [ 1.000, 0.576, 0.000 ]. PyMOL>color color13, resi 13 Executive: Colored 17 atoms. PyMOL>show sticks, res 13 PyMOL>set_color color14, [255, 227, 0] Color: "color14" defined as [ 1.000, 0.890, 0.000 ]. PyMOL>color color14, resi 14 Executive: Colored 19 atoms. PyMOL>show sticks, res 14 PyMOL>set_color color16, [255, 160, 0] Color: "color16" defined as [ 1.000, 0.627, 0.000 ]. PyMOL>color color16, resi 16 Executive: Colored 16 atoms. PyMOL>show sticks, res 16 PyMOL>set_color color24, [0, 65, 255] Color: "color24" defined as [ 0.000, 0.255, 1.000 ]. PyMOL>color color24, resi 24 Executive: Colored 21 atoms. PyMOL>set_color color40, [149, 255, 0] Color: "color40" defined as [ 0.584, 1.000, 0.000 ]. PyMOL>color color40, resi 40 Executive: Colored 19 atoms. PyMOL>set_color color47, [0, 255, 222] Color: "color47" defined as [ 0.000, 1.000, 0.871 ]. PyMOL>color color47, resi 47 Executive: Colored 14 atoms. PyMOL>set_color color48, [0, 117, 255] Color: "color48" defined as [ 0.000, 0.459, 1.000 ]. PyMOL>color color48, resi 48 Executive: Colored 12 atoms. PyMOL>set_color color50, [0, 255, 76] Color: "color50" defined as [ 0.000, 1.000, 0.298 ]. PyMOL>color color50, resi 50 Executive: Colored 19 atoms. PyMOL>set_color color52, [0, 149, 255] Color: "color52" defined as [ 0.000, 0.584, 1.000 ]. PyMOL>color color52, resi 52 Executive: Colored 10 atoms. PyMOL>set_color color54, [255, 238, 0] Color: "color54" defined as [ 1.000, 0.933, 0.000 ]. PyMOL>color color54, resi 54 Executive: Colored 24 atoms. PyMOL>show sticks, res 54 PyMOL>set_color color71, [0, 65, 255] Color: "color71" defined as [ 0.000, 0.255, 1.000 ]. PyMOL>color color71, resi 71 Executive: Colored 18 atoms. PyMOL>set_color color74, [0, 50, 255] Color: "color74" defined as [ 0.000, 0.196, 1.000 ]. PyMOL>color color74, resi 74 Executive: Colored 17 atoms. PyMOL>set_color color75, [0, 15, 255] Color: "color75" defined as [ 0.000, 0.059, 1.000 ]. PyMOL>color color75, resi 75 Executive: Colored 19 atoms. PyMOL>set_color color79, [0, 255, 165] Color: "color79" defined as [ 0.000, 1.000, 0.647 ]. PyMOL>color color79, resi 79 Executive: Colored 22 atoms. PyMOL>set_color color81, [0, 7, 255] Color: "color81" defined as [ 0.000, 0.027, 1.000 ]. PyMOL>color color81, resi 81 Executive: Colored 14 atoms. PyMOL>set_color color82, [255, 14, 0] Color: "color82" defined as [ 1.000, 0.055, 0.000 ]. PyMOL>color color82, resi 82 Executive: Colored 20 atoms. PyMOL>show sticks, res 82 PyMOL>set_color color83, [0, 222, 255] Color: "color83" defined as [ 0.000, 0.871, 1.000 ]. PyMOL>color color83, resi 83 Executive: Colored 19 atoms. PyMOL>set_color color85, [0, 255, 243] Color: "color85" defined as [ 0.000, 1.000, 0.953 ]. PyMOL>color color85, resi 85 Executive: Colored 19 atoms. PyMOL>set_color color86, [0, 160, 255] Color: "color86" defined as [ 0.000, 0.627, 1.000 ]. PyMOL>color color86, resi 86 Executive: Colored 16 atoms. PyMOL>set_color color87, [0, 25, 255] Color: "color87" defined as [ 0.000, 0.098, 1.000 ]. PyMOL>color color87, resi 87 Executive: Colored 19 atoms. PyMOL>set_color color88, [0, 255, 166] Color: "color88" defined as [ 0.000, 1.000, 0.651 ]. PyMOL>color color88, resi 88 Executive: Colored 17 atoms. PyMOL>set_color color90, [0, 255, 203] Color: "color90" defined as [ 0.000, 1.000, 0.796 ]. PyMOL>color color90, resi 90 Executive: Colored 21 atoms. PyMOL>set_color color93, [0, 26, 255] Color: "color93" defined as [ 0.000, 0.102, 1.000 ]. PyMOL>color color93, resi 93 Executive: Colored 18 atoms. PyMOL>set_color color94, [0, 247, 255] Color: "color94" defined as [ 0.000, 0.969, 1.000 ]. PyMOL>color color94, resi 94 Executive: Colored 19 atoms. PyMOL>set_color color98, [0, 123, 255] Color: "color98" defined as [ 0.000, 0.482, 1.000 ]. PyMOL>color color98, resi 98 Executive: Colored 24 atoms. PyMOL>set_color color99, [0, 255, 178] Color: "color99" defined as [ 0.000, 1.000, 0.698 ]. PyMOL>color color99, resi 99 Executive: Colored 20 atoms. PyMOL>set_color color102, [0, 122, 255] Color: "color102" defined as [ 0.000, 0.478, 1.000 ]. PyMOL>color color102, resi 102 Executive: Colored 19 atoms. PyMOL>set_color color107, [0, 128, 255] Color: "color107" defined as [ 0.000, 0.502, 1.000 ]. PyMOL>color color107, resi 107 Executive: Colored 19 atoms. PyMOL>set_color color110, [255, 0, 0] Color: "color110" defined as [ 1.000, 0.000, 0.000 ]. PyMOL>color color110, resi 110 Executive: Colored 19 atoms. PyMOL>show sticks, res 110 PyMOL>set_color color113, [0, 33, 255] Color: "color113" defined as [ 0.000, 0.129, 1.000 ]. PyMOL>color color113, resi 113 Executive: Colored 16 atoms. PyMOL>set_color color117, [0, 96, 255] Color: "color117" defined as [ 0.000, 0.376, 1.000 ]. PyMOL>color color117, resi 117 Executive: Colored 19 atoms. PyMOL>label 13/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 14/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 16/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 54/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 82/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 110/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 1.19 sec. = 3014.0 frames/hour (1.19 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit