PyMOL>load ./SPR104_NMR_em_bcr3.pdb.iupac HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10-SEP-10 2L3A TITLE SOLUTION NMR STRUCTURE OF HOMODIMER PROTEIN SP_0782 (7-79) FROM TITLE 2 STREPTOCOCCUS PNEUMONIAE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TITLE 3 TARGET SPR104 . COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 7-79; COMPND 5 ENGINEERED: YES ObjectMolecule: Read secondary structure assignments. ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./SPR104_NMR_em_bcr3.pdb.iupac" loaded as "SPR104_NMR_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 2648 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color17, [0, 137, 255] Color: "color17" defined as [ 0.000, 0.537, 1.000 ]. PyMOL>color color17, resi 17 Executive: Colored 28 atoms. PyMOL>set_color color18, [0, 27, 255] Color: "color18" defined as [ 0.000, 0.106, 1.000 ]. PyMOL>color color18, resi 18 Executive: Colored 38 atoms. PyMOL>set_color color27, [0, 9, 255] Color: "color27" defined as [ 0.000, 0.035, 1.000 ]. PyMOL>color color27, resi 27 Executive: Colored 44 atoms. PyMOL>set_color color28, [0, 193, 255] Color: "color28" defined as [ 0.000, 0.757, 1.000 ]. PyMOL>color color28, resi 28 Executive: Colored 30 atoms. PyMOL>set_color color29, [0, 24, 255] Color: "color29" defined as [ 0.000, 0.094, 1.000 ]. PyMOL>color color29, resi 29 Executive: Colored 38 atoms. PyMOL>set_color color32, [0, 13, 255] Color: "color32" defined as [ 0.000, 0.051, 1.000 ]. PyMOL>color color32, resi 32 Executive: Colored 32 atoms. PyMOL>set_color color34, [0, 132, 255] Color: "color34" defined as [ 0.000, 0.518, 1.000 ]. PyMOL>color color34, resi 34 Executive: Colored 40 atoms. PyMOL>set_color color41, [0, 204, 255] Color: "color41" defined as [ 0.000, 0.800, 1.000 ]. PyMOL>color color41, resi 41 Executive: Colored 40 atoms. PyMOL>set_color color44, [0, 202, 255] Color: "color44" defined as [ 0.000, 0.792, 1.000 ]. PyMOL>color color44, resi 44 Executive: Colored 48 atoms. PyMOL>set_color color56, [0, 179, 255] Color: "color56" defined as [ 0.000, 0.702, 1.000 ]. PyMOL>color color56, resi 56 Executive: Colored 14 atoms. PyMOL>set_color color64, [0, 207, 255] Color: "color64" defined as [ 0.000, 0.812, 1.000 ]. PyMOL>color color64, resi 64 Executive: Colored 40 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 0.90 sec. = 3990.3 frames/hour (0.90 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit