PyMOL>load ./SGR42_R3_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./SGR42_R3_em_bcr3.pdb.iupac" loaded as "SGR42_R3_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 1072 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color2, [0, 234, 255] Color: "color2" defined as [ 0.000, 0.918, 1.000 ]. PyMOL>color color2, resi 2 Executive: Colored 19 atoms. PyMOL>set_color color3, [0, 112, 255] Color: "color3" defined as [ 0.000, 0.439, 1.000 ]. PyMOL>color color3, resi 3 Executive: Colored 20 atoms. PyMOL>set_color color4, [0, 164, 255] Color: "color4" defined as [ 0.000, 0.643, 1.000 ]. PyMOL>color color4, resi 4 Executive: Colored 14 atoms. PyMOL>set_color color8, [0, 138, 255] Color: "color8" defined as [ 0.000, 0.541, 1.000 ]. PyMOL>color color8, resi 8 Executive: Colored 16 atoms. PyMOL>set_color color9, [0, 255, 241] Color: "color9" defined as [ 0.000, 1.000, 0.945 ]. PyMOL>color color9, resi 9 Executive: Colored 24 atoms. PyMOL>set_color color10, [255, 191, 0] Color: "color10" defined as [ 1.000, 0.749, 0.000 ]. PyMOL>color color10, resi 10 Executive: Colored 16 atoms. PyMOL>show sticks, res 10 PyMOL>set_color color12, [0, 83, 255] Color: "color12" defined as [ 0.000, 0.325, 1.000 ]. PyMOL>color color12, resi 12 Executive: Colored 14 atoms. PyMOL>set_color color17, [121, 255, 0] Color: "color17" defined as [ 0.475, 1.000, 0.000 ]. PyMOL>color color17, resi 17 Executive: Colored 21 atoms. PyMOL>set_color color18, [0, 54, 255] Color: "color18" defined as [ 0.000, 0.212, 1.000 ]. PyMOL>color color18, resi 18 Executive: Colored 21 atoms. PyMOL>set_color color20, [0, 255, 107] Color: "color20" defined as [ 0.000, 1.000, 0.420 ]. PyMOL>color color20, resi 20 Executive: Colored 20 atoms. PyMOL>set_color color21, [0, 154, 255] Color: "color21" defined as [ 0.000, 0.604, 1.000 ]. PyMOL>color color21, resi 21 Executive: Colored 15 atoms. PyMOL>set_color color24, [0, 255, 202] Color: "color24" defined as [ 0.000, 1.000, 0.792 ]. PyMOL>color color24, resi 24 Executive: Colored 16 atoms. PyMOL>set_color color26, [0, 86, 255] Color: "color26" defined as [ 0.000, 0.337, 1.000 ]. PyMOL>color color26, resi 26 Executive: Colored 24 atoms. PyMOL>set_color color27, [0, 128, 255] Color: "color27" defined as [ 0.000, 0.502, 1.000 ]. PyMOL>color color27, resi 27 Executive: Colored 16 atoms. PyMOL>set_color color31, [0, 189, 255] Color: "color31" defined as [ 0.000, 0.741, 1.000 ]. PyMOL>color color31, resi 31 Executive: Colored 22 atoms. PyMOL>set_color color32, [0, 162, 255] Color: "color32" defined as [ 0.000, 0.635, 1.000 ]. PyMOL>color color32, resi 32 Executive: Colored 10 atoms. PyMOL>set_color color33, [0, 34, 255] Color: "color33" defined as [ 0.000, 0.133, 1.000 ]. PyMOL>color color33, resi 33 Executive: Colored 10 atoms. PyMOL>set_color color34, [255, 192, 0] Color: "color34" defined as [ 1.000, 0.753, 0.000 ]. PyMOL>color color34, resi 34 Executive: Colored 16 atoms. PyMOL>show sticks, res 34 PyMOL>set_color color35, [0, 168, 255] Color: "color35" defined as [ 0.000, 0.659, 1.000 ]. PyMOL>color color35, resi 35 Executive: Colored 19 atoms. PyMOL>set_color color36, [0, 255, 171] Color: "color36" defined as [ 0.000, 1.000, 0.671 ]. PyMOL>color color36, resi 36 Executive: Colored 20 atoms. PyMOL>set_color color43, [0, 110, 255] Color: "color43" defined as [ 0.000, 0.431, 1.000 ]. PyMOL>color color43, resi 43 Executive: Colored 22 atoms. PyMOL>set_color color44, [0, 47, 255] Color: "color44" defined as [ 0.000, 0.184, 1.000 ]. PyMOL>color color44, resi 44 Executive: Colored 19 atoms. PyMOL>set_color color45, [0, 12, 255] Color: "color45" defined as [ 0.000, 0.047, 1.000 ]. PyMOL>color color45, resi 45 Executive: Colored 16 atoms. PyMOL>set_color color46, [0, 191, 255] Color: "color46" defined as [ 0.000, 0.749, 1.000 ]. PyMOL>color color46, resi 46 Executive: Colored 14 atoms. PyMOL>set_color color47, [0, 255, 47] Color: "color47" defined as [ 0.000, 1.000, 0.184 ]. PyMOL>color color47, resi 47 Executive: Colored 20 atoms. PyMOL>set_color color48, [0, 255, 225] Color: "color48" defined as [ 0.000, 1.000, 0.882 ]. PyMOL>color color48, resi 48 Executive: Colored 24 atoms. PyMOL>set_color color49, [0, 255, 16] Color: "color49" defined as [ 0.000, 1.000, 0.063 ]. PyMOL>color color49, resi 49 Executive: Colored 19 atoms. PyMOL>set_color color51, [0, 248, 255] Color: "color51" defined as [ 0.000, 0.973, 1.000 ]. PyMOL>color color51, resi 51 Executive: Colored 15 atoms. PyMOL>set_color color52, [255, 0, 0] Color: "color52" defined as [ 1.000, 0.000, 0.000 ]. PyMOL>color color52, resi 52 Executive: Colored 19 atoms. PyMOL>show sticks, res 52 PyMOL>set_color color54, [0, 23, 255] Color: "color54" defined as [ 0.000, 0.090, 1.000 ]. PyMOL>color color54, resi 54 Executive: Colored 10 atoms. PyMOL>set_color color55, [0, 79, 255] Color: "color55" defined as [ 0.000, 0.310, 1.000 ]. PyMOL>color color55, resi 55 Executive: Colored 16 atoms. PyMOL>set_color color56, [0, 81, 255] Color: "color56" defined as [ 0.000, 0.318, 1.000 ]. PyMOL>color color56, resi 56 Executive: Colored 22 atoms. PyMOL>set_color color57, [0, 16, 255] Color: "color57" defined as [ 0.000, 0.063, 1.000 ]. PyMOL>color color57, resi 57 Executive: Colored 14 atoms. PyMOL>label 10/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 34/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 52/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 0.36 sec. = 9970.7 frames/hour (0.36 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit