PyMOL>load ./RPR324_R3_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./RPR324_R3_em_bcr3.pdb.iupac" loaded as "RPR324_R3_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 1581 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color4, [35, 255, 0] Color: "color4" defined as [ 0.137, 1.000, 0.000 ]. PyMOL>color color4, resi 4 Executive: Colored 14 atoms. PyMOL>set_color color7, [0, 95, 255] Color: "color7" defined as [ 0.000, 0.373, 1.000 ]. PyMOL>color color7, resi 7 Executive: Colored 24 atoms. PyMOL>set_color color8, [0, 12, 255] Color: "color8" defined as [ 0.000, 0.047, 1.000 ]. PyMOL>color color8, resi 8 Executive: Colored 16 atoms. PyMOL>set_color color11, [105, 255, 0] Color: "color11" defined as [ 0.412, 1.000, 0.000 ]. PyMOL>color color11, resi 11 Executive: Colored 19 atoms. PyMOL>set_color color12, [0, 255, 157] Color: "color12" defined as [ 0.000, 1.000, 0.616 ]. PyMOL>color color12, resi 12 Executive: Colored 19 atoms. PyMOL>set_color color13, [0, 163, 255] Color: "color13" defined as [ 0.000, 0.639, 1.000 ]. PyMOL>color color13, resi 13 Executive: Colored 10 atoms. PyMOL>set_color color16, [0, 166, 255] Color: "color16" defined as [ 0.000, 0.651, 1.000 ]. PyMOL>color color16, resi 16 Executive: Colored 11 atoms. PyMOL>set_color color18, [0, 91, 255] Color: "color18" defined as [ 0.000, 0.357, 1.000 ]. PyMOL>color color18, resi 18 Executive: Colored 19 atoms. PyMOL>set_color color23, [0, 120, 255] Color: "color23" defined as [ 0.000, 0.471, 1.000 ]. PyMOL>color color23, resi 23 Executive: Colored 19 atoms. PyMOL>set_color color30, [0, 255, 121] Color: "color30" defined as [ 0.000, 1.000, 0.475 ]. PyMOL>color color30, resi 30 Executive: Colored 19 atoms. PyMOL>set_color color35, [0, 162, 255] Color: "color35" defined as [ 0.000, 0.635, 1.000 ]. PyMOL>color color35, resi 35 Executive: Colored 19 atoms. PyMOL>set_color color36, [0, 2, 255] Color: "color36" defined as [ 0.000, 0.008, 1.000 ]. PyMOL>color color36, resi 36 Executive: Colored 12 atoms. PyMOL>set_color color37, [0, 44, 255] Color: "color37" defined as [ 0.000, 0.173, 1.000 ]. PyMOL>color color37, resi 37 Executive: Colored 11 atoms. PyMOL>set_color color40, [0, 255, 243] Color: "color40" defined as [ 0.000, 1.000, 0.953 ]. PyMOL>color color40, resi 40 Executive: Colored 20 atoms. PyMOL>set_color color43, [0, 255, 226] Color: "color43" defined as [ 0.000, 1.000, 0.886 ]. PyMOL>color color43, resi 43 Executive: Colored 19 atoms. PyMOL>set_color color44, [0, 24, 255] Color: "color44" defined as [ 0.000, 0.094, 1.000 ]. PyMOL>color color44, resi 44 Executive: Colored 10 atoms. PyMOL>set_color color47, [180, 255, 0] Color: "color47" defined as [ 0.706, 1.000, 0.000 ]. PyMOL>color color47, resi 47 Executive: Colored 19 atoms. PyMOL>set_color color51, [0, 255, 116] Color: "color51" defined as [ 0.000, 1.000, 0.455 ]. PyMOL>color color51, resi 51 Executive: Colored 20 atoms. PyMOL>set_color color53, [0, 43, 255] Color: "color53" defined as [ 0.000, 0.169, 1.000 ]. PyMOL>color color53, resi 53 Executive: Colored 19 atoms. PyMOL>set_color color55, [0, 93, 255] Color: "color55" defined as [ 0.000, 0.365, 1.000 ]. PyMOL>color color55, resi 55 Executive: Colored 19 atoms. PyMOL>set_color color56, [0, 207, 255] Color: "color56" defined as [ 0.000, 0.812, 1.000 ]. PyMOL>color color56, resi 56 Executive: Colored 14 atoms. PyMOL>set_color color57, [0, 36, 255] Color: "color57" defined as [ 0.000, 0.141, 1.000 ]. PyMOL>color color57, resi 57 Executive: Colored 19 atoms. PyMOL>set_color color60, [255, 240, 0] Color: "color60" defined as [ 1.000, 0.941, 0.000 ]. PyMOL>color color60, resi 60 Executive: Colored 24 atoms. PyMOL>show sticks, res 60 PyMOL>set_color color71, [255, 90, 0] Color: "color71" defined as [ 1.000, 0.353, 0.000 ]. PyMOL>color color71, resi 71 Executive: Colored 14 atoms. PyMOL>show sticks, res 71 PyMOL>set_color color74, [51, 255, 0] Color: "color74" defined as [ 0.200, 1.000, 0.000 ]. PyMOL>color color74, resi 74 Executive: Colored 21 atoms. PyMOL>set_color color75, [255, 0, 0] Color: "color75" defined as [ 1.000, 0.000, 0.000 ]. PyMOL>color color75, resi 75 Executive: Colored 20 atoms. PyMOL>show sticks, res 75 PyMOL>set_color color80, [0, 82, 255] Color: "color80" defined as [ 0.000, 0.322, 1.000 ]. PyMOL>color color80, resi 80 Executive: Colored 19 atoms. PyMOL>set_color color84, [0, 206, 255] Color: "color84" defined as [ 0.000, 0.808, 1.000 ]. PyMOL>color color84, resi 84 Executive: Colored 19 atoms. PyMOL>set_color color85, [0, 5, 255] Color: "color85" defined as [ 0.000, 0.020, 1.000 ]. PyMOL>color color85, resi 85 Executive: Colored 12 atoms. PyMOL>label 60/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 71/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 75/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 0.75 sec. = 4823.3 frames/hour (0.75 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit