PROCHECK-NMR. PROCHECK v.3.5.4 (Feb 2001) ----------------------------------------- Coordinates file: [ PSR293_XRay_em_bcr3_noHs.pdb ] * No ranges file supplied - all models and residues will be included Program directory: /farm/software/procheck/ Running clean-up on file: PSR293_XRay_em_bcr3_noHs.pdb ** Unrecognized atom type [ SE ] in residue MET M 1 ** Unrecognized atom type [ SE ] in residue MET M 44 ** Unrecognized atom type [ SE ] in residue MET M 86 ** Unrecognized atom type [ SE ] in residue MET M 128 ** Unrecognized atom type [ SE ] in residue MET M 171 ** Unrecognized atom type [ SE ] in residue MET M 213 ** Unrecognized atom type [ SE ] in residue MET M 255 ** Unrecognized atom type [ SE ] in residue MET M 298 ** Unrecognized atom type [ SE ] in residue MET M 340 ** Unrecognized atom type [ SE ] in residue MET M 382 ** Unrecognized atom type [ SE ] in residue MET M 425 ** Unrecognized atom type [ SE ] in residue MET M 467 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * PHE M 6 ASP M 8 ASP M 27 TYR M 28 ARG M 32 ASP M 37 ASP M 56 * GLU M 69 PHE M 133 ASP M 135 ASP M 154 TYR M 155 ARG M 159 ASP M 164 * ASP M 183 GLU M 196 PHE M 260 ASP M 262 TYR M 263 ASP M 281 TYR M 282 * ARG M 286 ASP M 291 ASP M 310 GLU M 323 PHE M 387 ASP M 389 ASP M 408 * TYR M 409 ARG M 413 ASP M 418 ASP M 437 GLU M 450 * NMR ensemble comprises 1 model structures * Program completed ................................................................. Secondary structure assignment * NMR ensemble comprises 1 model structures * Program completed .................................................................. RMS deviations for ensemble * Warning. No MODEL records found in PDB file * Single structure assumed; no RMS deviations to be calculated * Program completed .................................................................. Phi-psi and chi1-chi2 distributions Main Ramachandran plot * File: All-residue Ramachandran plots * File: All-residue chi1-chi2 plots * File: * Program complete .................................................................. Dihedral angle distributions and quality plots **** No torsion angle restraints found Phi angle distributions * File: Psi angle distributions * File: Chi-1 angle distributions * File: Chi-2 angle distributions * File: Ensemble Ramachandran plots * File: Ensemble chi1-chi2 plots * File: Residue properties plot * File: Model secondary structures * File: .................................................................. Restraints and restraint violation plots * * Restraints read in from file: * PSR293_XRay_em_bcr3_noHs.nrv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Restraints read in from file: * PSR293_XRay_em_bcr3_noHs.hrv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Restraints read in from file: * PSR293_XRay_em_bcr3_noHs.srv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Total number of restraints read in: 0 * **** No distance restraints found **** No torsion angle restraints found * **** No restraints found, so no restraint plots will be produced ..................................................................