Running PDBSTAT from Linux 
  Ayuda is on: /farm/software/PdbStat/PdbStat-5.7

  (C)
  (C)  Pdbstat -- A program to evaluate some statistics of macromolecules,
  (C)             given the cartesian coordinates.
  (C)
  (C)  (c) Copyright 1992-2012 Roberto Tejero and Gaetano T. Montelione
  (C)      Center for Advanced Technology and Medicine (CABM)
  (C)      Rutgers University
  (C)
       ** VERSION:  5.7-exp dom mar 10 23:17:04 UTC 2013  ** 
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
       ===============>  W E L C O M E  to PDBStat <================   
 PDBStat has become a tool able (between other things) of:
    a) read and interconvert between DISMAN, DYANA, PDB, DISCOVER, IMPACT 
    b) elaborate some info about the molecule as MW, Radius of gyration, .. 
    c) investigate the setereochemical quality of a protein by evaluating 
       phi, psi, chi1, impropers and chirality 
 The sequence of acts should be: 
       1.- read a file (coords, constr) 
       2.- read a sequence file (can be free format) 
       3.- Follow menu (calculating, writing ...) 

   NOTE: Be aware that if you read in a constraint file you 
         *ALWAYS* need to read a sequence file also

 HAVE FUN AND ENJOY !!
 **** For more info type `help' or `menu' **** 

  --> ... Reading/Loading Distances file  ...  125 distance records read
  --> ... Reading/Loading Dihedral Library .. 1119 library records read

PdbStat> [rea]d [hel]p [his]tory [men]u [phi] [qui]t...

PdbStat>  leyendo PDB 
  > locate_file(): file `temp_bcm_111.pdb' opened for reading 
  > ReadCoordsPdb(): >> HEADER    STRUCTURAL GENOMICS, UNKNOWN FUNCTION   21-JUL-09   3IDU              
  > ReadCoordsPdb(): >> TITLE     CRYSTAL STRUCTURE OF THE CARDB DOMAIN OF THE PF1109 PROTEIN           
  > ReadCoordsPdb(): >> TITLE    2 IN COMPLEX WITH DI-METAL IONS FROM PYROCOCCUS FURIOSUS,              
  > ReadCoordsPdb(): >> TITLE    3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PFR193A              
  > ReadCoordsPdb(): >> COMPND    MOL_ID: 1;                                                            
   1  > ReadCoordsPdb(): After scanning there is(are) 1 model(s) 

  > ReadCoordsPdb(): *** SUMMARY ***
  > ReadCoordsPdb(): -->  1782 ATOM records read from file 
  > ReadCoordsPdb(): -->  1782 Regular IUPAC Atoms 
  > ReadCoordsPdb(): -->     0 Pseudo-atoms (DISMAN type) 
  > ReadCoordsPdb(): -->     0 Lone pairs
  > ReadCoordsPdb(): Bye ... 
  > =============================== INFO ================================ 
  > INFO_mol: # atoms:     1782 (1135 C, 0 H, 357 O, 286 N, 0 S, 0 Q, 4 Metals)
  > INFO_mol: # residues:     226 (Avg. mol. weight: 104.4)
  > INFO_mol: # -- M.W. : 23587.6 g/mol. (23.59 kD)     Estimated RoG <S2>:  17.26 
  > INFO_mol: CenterMass() -- Working PDB model 1 in file, model no. 1 
  > INFO_mol: CenterMass() -- Molecule `temp_bcm_111.pdb' model #1, TOTAL RESIDUES: 226
  > INFO_mol: Radius of Gyration <S2> :    19.8989  angstroms 
  > INFO_mol: Center of Masses: x_cm(3.315), y_cm(0.056), z_cm(15.356) 

  > INFO_res:  TDYDKLSNLT FEFPDLTVEI KGPDVVGVNK LAEYEVHVKN LGGIGVPSTK 
  > INFO_res:  VRVYINGTLY KNWTVSLGPK EEKVLTFNWT PTQEGYRINA TVDEENTVVE 
  > INFO_res:  LNENNNVATF DVSVVTTFEF PDLTVEIKGP DVVGVNKLAE YEVHVKNLGG 
  > INFO_res:  IGVPSTKVRV YINGTLYKNW TVSLGPKEEK VLTFNWTPTQ EGYRINATVD 
  > INFO_res:  EENTVVELNE NNNVATFDVS VVLE
  > INFO_res:  
  > INFO_res:  THR  ASP  TYR  ASP  LYS  LEU  SER  ASN  LEU  THR  PHE  GLU  
  > INFO_res:  PHE  PRO  ASP  LEU  THR  VAL  GLU  ILE  LYS  GLY  PRO  ASP  
  > INFO_res:  VAL  VAL  GLY  VAL  ASN  LYS  LEU  ALA  GLU  TYR  GLU  VAL  
  > INFO_res:  HIS  VAL  LYS  ASN  LEU  GLY  GLY  ILE  GLY  VAL  PRO  SER  
  > INFO_res:  THR  LYS  VAL  ARG  VAL  TYR  ILE  ASN  GLY  THR  LEU  TYR  
  > INFO_res:  LYS  ASN  TRP  THR  VAL  SER  LEU  GLY  PRO  LYS  GLU  GLU  
  > INFO_res:  LYS  VAL  LEU  THR  PHE  ASN  TRP  THR  PRO  THR  GLN  GLU  
  > INFO_res:  GLY  MSE  TYR  ARG  ILE  ASN  ALA  THR  VAL  ASP  GLU  GLU  
  > INFO_res:  ASN  THR  VAL  VAL  GLU  LEU  ASN  GLU  ASN  ASN  ASN  VAL  
  > INFO_res:  ALA  THR  PHE  ASP  VAL  SER  VAL  VAL  THR  THR  PHE  GLU  
  > INFO_res:  PHE  PRO  ASP  LEU  THR  VAL  GLU  ILE  LYS  GLY  PRO  ASP  
  > INFO_res:  VAL  VAL  GLY  VAL  ASN  LYS  LEU  ALA  GLU  TYR  GLU  VAL  
  > INFO_res:  HIS  VAL  LYS  ASN  LEU  GLY  GLY  ILE  GLY  VAL  PRO  SER  
  > INFO_res:  THR  LYS  VAL  ARG  VAL  TYR  ILE  ASN  GLY  THR  LEU  TYR  
  > INFO_res:  LYS  ASN  TRP  THR  VAL  SER  LEU  GLY  PRO  LYS  GLU  GLU  
  > INFO_res:  LYS  VAL  LEU  THR  PHE  ASN  TRP  THR  PRO  THR  GLN  GLU  
  > INFO_res:  GLY  MSE  TYR  ARG  ILE  ASN  ALA  THR  VAL  ASP  GLU  GLU  
  > INFO_res:  ASN  THR  VAL  VAL  GLU  LEU  ASN  GLU  ASN  ASN  ASN  VAL  
  > INFO_res:  ALA  THR  PHE  ASP  VAL  SER  VAL  VAL  LEU  GLU  
  > INFO_res:  
  > INFO_res:   6 ALA     4 ARG    23 ASN    10 ASP     2 GLN    23 GLU  
  > INFO_res:  16 GLY     2 HIS     8 ILE    17 LEU    15 LYS     8 PHE  
  > INFO_res:  10 PRO     7 SER    24 THR     9 TYR     4 TRP    36 VAL  
  > INFO_res:   2 MSE  
  > INFO_res: DISULFIDE: ** NO INFO FOR DISULFIDES IN FILE 
  > ===================================================================== 
  > ReadCoordsPdb():  *** x-mer, 2 [2] chains 


PdbStat> PdbStat>  ** Model with _NO_ hydrogens, nothing to fix

PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER: ... backbone, heavy, full set? (back/heavy/all/select):   > COORD_writer: Format  (pdb/congen/RasMol) ? :   > COORD_writer: * ---- Wrong typing BUDDY !! ----- *
  > COORD_writer: * Option NOT recognized, type again please *
  > COORD_writer: Format  (pdb/congen/RasMol) ? : 
PdbStat> PdbStat>  ** Model with _NO_ hydrogens, nothing to fix

PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER: ... backbone, heavy, full set? (back/heavy/all/select):   > COORD_writer: Format  (pdb/congen/RasMol) ? :   > COORD_writer: * ---- Wrong typing BUDDY !! ----- *
  > COORD_writer: * Option NOT recognized, type again please *
  > COORD_writer: Format  (pdb/congen/RasMol) ? : 
PdbStat> 
PdbStat>  *END* of program detected, BYE! ...