read coor pdb OR8C_R3_em_bcr3.pdb
all
rmsd coor heavy 4A-80A,87A-119A,129A-133A
ave
resOrd_rmsd_heavy
rmsd coor backbone 4A-80A,87A-119A,129A-133A
ave
resOrd_rmsd_bb
write
best.pdb
coor
all
all
pdb
quit