read coor pdb OR8C_R3Cons_em_bcr3.pdb
all
rmsd coor heavy 4A-80A,86A-119A,129A-132A
ave
resSel_rmsd_heavy
rmsd coor backbone 4A-80A,86A-119A,129A-132A
ave
resSel_rmsd_bb
write
selSi.pdb
coor
all
all
pdb
quit