load ./selSi.pdb,obj
hide everything, all
dss
show cartoon, all
set bg_rgb, [1,1,1]
color red, ss h
color cyan,ss s
color gray,ss ""+l
set cartoon_highlight_color,yellow
orient
set ray_trace_mode, 3
set antialias, 2
ray 600,600
png molecule.png
set stereo,1
set all_states,1
stereo walleye
select bb,n. c+ca+n
hide everything,all
show lines,bb
color blue,bb
set line_width,0.5
set bg_rgb, [1,1,1]
zoom complete=1
set ray_trace_mode, 0
ray 1200,600
png stereo.png
run /data/PSVS/PSVS-v1.4-dev/strcalc//average3d.py
from average3d import avgStates
set all_states,1
set stereo,0
hide everything, all
avgStates('obj','name CA',1,0,'yesfit_ALL','yes',1,0,0)
cartoon putty, yesfit_ALL and name CA
show cartoon, yesfit_ALL and name CA
color red, ss h
color cyan,ss s
color gray,ss ""+l
set cartoon_highlight_color,yellow
set bg_rgb, [1,1,1]
set ray_trace_mode, 3
ray 600,600
png sausage.png
quit