PyMOL>load ./MBR242E_R3_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./MBR242E_R3_em_bcr3.pdb.iupac" loaded as "MBR242E_R3_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 3328 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color12, [58, 255, 0] Color: "color12" defined as [ 0.227, 1.000, 0.000 ]. PyMOL>color color12, resi 12 Executive: Colored 38 atoms. PyMOL>set_color color14, [0, 189, 255] Color: "color14" defined as [ 0.000, 0.741, 1.000 ]. PyMOL>color color14, resi 14 Executive: Colored 34 atoms. PyMOL>set_color color15, [105, 255, 0] Color: "color15" defined as [ 0.412, 1.000, 0.000 ]. PyMOL>color color15, resi 15 Executive: Colored 32 atoms. PyMOL>set_color color16, [0, 21, 255] Color: "color16" defined as [ 0.000, 0.082, 1.000 ]. PyMOL>color color16, resi 16 Executive: Colored 20 atoms. PyMOL>set_color color17, [0, 90, 255] Color: "color17" defined as [ 0.000, 0.353, 1.000 ]. PyMOL>color color17, resi 17 Executive: Colored 48 atoms. PyMOL>set_color color22, [0, 44, 255] Color: "color22" defined as [ 0.000, 0.173, 1.000 ]. PyMOL>color color22, resi 22 Executive: Colored 38 atoms. PyMOL>set_color color30, [255, 239, 0] Color: "color30" defined as [ 1.000, 0.937, 0.000 ]. PyMOL>color color30, resi 30 Executive: Colored 38 atoms. PyMOL>show sticks, res 30 PyMOL>set_color color31, [0, 255, 139] Color: "color31" defined as [ 0.000, 1.000, 0.545 ]. PyMOL>color color31, resi 31 Executive: Colored 38 atoms. PyMOL>set_color color33, [0, 96, 255] Color: "color33" defined as [ 0.000, 0.376, 1.000 ]. PyMOL>color color33, resi 33 Executive: Colored 38 atoms. PyMOL>set_color color34, [156, 255, 0] Color: "color34" defined as [ 0.612, 1.000, 0.000 ]. PyMOL>color color34, resi 34 Executive: Colored 38 atoms. PyMOL>set_color color38, [0, 255, 33] Color: "color38" defined as [ 0.000, 1.000, 0.129 ]. PyMOL>color color38, resi 38 Executive: Colored 30 atoms. PyMOL>set_color color39, [0, 186, 255] Color: "color39" defined as [ 0.000, 0.729, 1.000 ]. PyMOL>color color39, resi 39 Executive: Colored 48 atoms. PyMOL>set_color color40, [0, 87, 255] Color: "color40" defined as [ 0.000, 0.341, 1.000 ]. PyMOL>color color40, resi 40 Executive: Colored 20 atoms. PyMOL>set_color color41, [0, 53, 255] Color: "color41" defined as [ 0.000, 0.208, 1.000 ]. PyMOL>color color41, resi 41 Executive: Colored 32 atoms. PyMOL>set_color color44, [255, 164, 0] Color: "color44" defined as [ 1.000, 0.643, 0.000 ]. PyMOL>color color44, resi 44 Executive: Colored 38 atoms. PyMOL>show sticks, res 44 PyMOL>set_color color45, [0, 165, 255] Color: "color45" defined as [ 0.000, 0.647, 1.000 ]. PyMOL>color color45, resi 45 Executive: Colored 20 atoms. PyMOL>set_color color48, [0, 88, 255] Color: "color48" defined as [ 0.000, 0.345, 1.000 ]. PyMOL>color color48, resi 48 Executive: Colored 28 atoms. PyMOL>set_color color50, [0, 255, 32] Color: "color50" defined as [ 0.000, 1.000, 0.125 ]. PyMOL>color color50, resi 50 Executive: Colored 34 atoms. PyMOL>set_color color52, [0, 35, 255] Color: "color52" defined as [ 0.000, 0.137, 1.000 ]. PyMOL>color color52, resi 52 Executive: Colored 38 atoms. PyMOL>set_color color54, [0, 255, 103] Color: "color54" defined as [ 0.000, 1.000, 0.404 ]. PyMOL>color color54, resi 54 Executive: Colored 28 atoms. PyMOL>set_color color55, [0, 47, 255] Color: "color55" defined as [ 0.000, 0.184, 1.000 ]. PyMOL>color color55, resi 55 Executive: Colored 20 atoms. PyMOL>set_color color59, [0, 255, 170] Color: "color59" defined as [ 0.000, 1.000, 0.667 ]. PyMOL>color color59, resi 59 Executive: Colored 38 atoms. PyMOL>set_color color67, [0, 230, 255] Color: "color67" defined as [ 0.000, 0.902, 1.000 ]. PyMOL>color color67, resi 67 Executive: Colored 38 atoms. PyMOL>set_color color68, [0, 170, 255] Color: "color68" defined as [ 0.000, 0.667, 1.000 ]. PyMOL>color color68, resi 68 Executive: Colored 32 atoms. PyMOL>set_color color69, [0, 15, 255] Color: "color69" defined as [ 0.000, 0.059, 1.000 ]. PyMOL>color color69, resi 69 Executive: Colored 30 atoms. PyMOL>set_color color72, [0, 54, 255] Color: "color72" defined as [ 0.000, 0.212, 1.000 ]. PyMOL>color color72, resi 72 Executive: Colored 48 atoms. PyMOL>set_color color77, [0, 135, 255] Color: "color77" defined as [ 0.000, 0.529, 1.000 ]. PyMOL>color color77, resi 77 Executive: Colored 34 atoms. PyMOL>set_color color78, [68, 255, 0] Color: "color78" defined as [ 0.267, 1.000, 0.000 ]. PyMOL>color color78, resi 78 Executive: Colored 42 atoms. PyMOL>set_color color79, [54, 255, 0] Color: "color79" defined as [ 0.212, 1.000, 0.000 ]. PyMOL>color color79, resi 79 Executive: Colored 42 atoms. PyMOL>set_color color80, [0, 255, 26] Color: "color80" defined as [ 0.000, 1.000, 0.102 ]. PyMOL>color color80, resi 80 Executive: Colored 48 atoms. PyMOL>set_color color81, [0, 225, 255] Color: "color81" defined as [ 0.000, 0.882, 1.000 ]. PyMOL>color color81, resi 81 Executive: Colored 38 atoms. PyMOL>set_color color82, [0, 52, 255] Color: "color82" defined as [ 0.000, 0.204, 1.000 ]. PyMOL>color color82, resi 82 Executive: Colored 20 atoms. PyMOL>set_color color86, [0, 250, 255] Color: "color86" defined as [ 0.000, 0.980, 1.000 ]. PyMOL>color color86, resi 86 Executive: Colored 32 atoms. PyMOL>set_color color90, [0, 138, 255] Color: "color90" defined as [ 0.000, 0.541, 1.000 ]. PyMOL>color color90, resi 90 Executive: Colored 40 atoms. PyMOL>label 30/ca,"%s" %(resi) Label: labelled 2 atoms. PyMOL>label 44/ca,"%s" %(resi) Label: labelled 2 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 1.87 sec. = 1921.1 frames/hour (1.87 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit