# created by ASDP Version 1.0 Copyright(C) 2010 # Fri May 10 12:31:46 2013 # Command: /farm/software/asdp/asdp-1.0-release/bin//../bin/noesyassign # -c /data/PSVS/PSVS-v1.4-dev/results/MBR242E_NMR_em_bcr3/rpf_calc/input/ctrl_file # -o rpf_calc # -q MBR242E_NMR_em_bcr3.pdb.iupac # Summary for n.peaks Total simulated peaks: 178 Number of peaks NOT matched in the Peak List: 26 M score = 0.15 Average shift in HX: 0.0068 Average ab-shift in HX: 0.0079(Assignment used: 111) Average shift in X: 0.027 Average ab-shift in X: 0.049(Assignment used: 104) Average shift in HX2: 0.00064 Average ab-shift in HX2: 0.01(Assignment used: 130) #For peaklist n.peaks: Rmax: 5 Model ave Inconsistent score: 0.0206(17/826) Model 1 Inconsistent score: 0.0206(17/826) Model 2 Inconsistent score: 0.0206(17/826) Model 3 Inconsistent score: 0.023(19/826) Model 4 Inconsistent score: 0.0218(18/826) Model 5 Inconsistent score: 0.0169(14/826) Model 6 Inconsistent score: 0.023(19/826) Model 7 Inconsistent score: 0.0182(15/826) Model 8 Inconsistent score: 0.0218(18/826) Model 9 Inconsistent score: 0.0157(13/826) Model 10 Inconsistent score: 0.0242(20/826) Model 11 Inconsistent score: 0.0206(17/826) Model 12 Inconsistent score: 0.0278(23/826) Model 13 Inconsistent score: 0.023(19/826) Model 14 Inconsistent score: 0.0206(17/826) Model 15 Inconsistent score: 0.0266(22/826) Model 16 Inconsistent score: 0.0194(16/826) Model 17 Inconsistent score: 0.0206(17/826) Model 18 Inconsistent score: 0.0169(14/826) Model 19 Inconsistent score: 0.0182(15/826) Model 20 Inconsistent score: 0.0194(16/826) Model ave Missing interactions: 0.413 (620/1500) weighted: 0.0961 (3.31e+05/3.44e+06) <3: 0.0659 (11/167) <3w: 0.0536 (6.01e+04/1.12e+06) Model 1 Missing interactions: 0.425 (667/1570) weighted: 0.114 (4.46e+05/3.9e+06) <3: 0.0663 (11/166) <3w: 0.0537 (6.1e+04/1.14e+06) Model 2 Missing interactions: 0.427 (667/1563) weighted: 0.0958 (3.66e+05/3.82e+06) <3: 0.0651 (11/169) <3w: 0.0472 (5.4e+04/1.14e+06) Model 3 Missing interactions: 0.428 (660/1541) weighted: 0.103 (3.83e+05/3.73e+06) <3: 0.0651 (11/169) <3w: 0.0552 (6.25e+04/1.13e+06) Model 4 Missing interactions: 0.423 (661/1563) weighted: 0.114 (4.38e+05/3.84e+06) <3: 0.0655 (11/168) <3w: 0.0452 (5.18e+04/1.15e+06) Model 5 Missing interactions: 0.432 (686/1587) weighted: 0.107 (4.13e+05/3.87e+06) <3: 0.0651 (11/169) <3w: 0.0604 (7e+04/1.16e+06) Model 6 Missing interactions: 0.425 (653/1538) weighted: 0.107 (4.03e+05/3.76e+06) <3: 0.0659 (11/167) <3w: 0.0394 (4.47e+04/1.13e+06) Model 7 Missing interactions: 0.428 (676/1579) weighted: 0.107 (4.03e+05/3.78e+06) <3: 0.0651 (11/169) <3w: 0.059 (6.63e+04/1.12e+06) Model 8 Missing interactions: 0.434 (683/1572) weighted: 0.108 (4.03e+05/3.75e+06) <3: 0.0663 (11/166) <3w: 0.0566 (6.49e+04/1.15e+06) Model 9 Missing interactions: 0.429 (676/1576) weighted: 0.111 (4.36e+05/3.92e+06) <3: 0.0663 (11/166) <3w: 0.0458 (5.24e+04/1.14e+06) Model 10 Missing interactions: 0.436 (692/1586) weighted: 0.104 (3.96e+05/3.79e+06) <3: 0.0651 (11/169) <3w: 0.0471 (5.34e+04/1.13e+06) Model 11 Missing interactions: 0.434 (685/1580) weighted: 0.102 (3.93e+05/3.86e+06) <3: 0.0643 (11/171) <3w: 0.0458 (5.18e+04/1.13e+06) Model 12 Missing interactions: 0.431 (675/1566) weighted: 0.109 (4.15e+05/3.81e+06) <3: 0.0663 (11/166) <3w: 0.0483 (5.49e+04/1.14e+06) Model 13 Missing interactions: 0.432 (683/1580) weighted: 0.1 (3.74e+05/3.72e+06) <3: 0.0663 (11/166) <3w: 0.0418 (4.71e+04/1.13e+06) Model 14 Missing interactions: 0.433 (681/1573) weighted: 0.108 (4.15e+05/3.84e+06) <3: 0.0647 (11/170) <3w: 0.0539 (6.2e+04/1.15e+06) Model 15 Missing interactions: 0.427 (652/1528) weighted: 0.101 (3.84e+05/3.78e+06) <3: 0.0663 (11/166) <3w: 0.0452 (5.08e+04/1.12e+06) Model 16 Missing interactions: 0.429 (669/1558) weighted: 0.102 (3.86e+05/3.78e+06) <3: 0.0647 (11/170) <3w: 0.0505 (5.67e+04/1.12e+06) Model 17 Missing interactions: 0.429 (672/1567) weighted: 0.114 (4.32e+05/3.81e+06) <3: 0.0659 (11/167) <3w: 0.0599 (6.78e+04/1.13e+06) Model 18 Missing interactions: 0.424 (656/1548) weighted: 0.116 (4.36e+05/3.77e+06) <3: 0.0655 (11/168) <3w: 0.0471 (5.3e+04/1.12e+06) Model 19 Missing interactions: 0.426 (664/1558) weighted: 0.0973 (3.72e+05/3.82e+06) <3: 0.0655 (11/168) <3w: 0.0469 (5.36e+04/1.14e+06) Model 20 Missing interactions: 0.426 (658/1546) weighted: 0.111 (4.27e+05/3.83e+06) <3: 0.0655 (11/168) <3w: 0.0479 (5.48e+04/1.14e+06) Model ave Recall: 0.979 Precision: all: 0.587 allw: 0.904 <3: 0.934 <3w: 0.946 F-measure:(Recall,Precision) 0.734 F-measure:(Recall,PrecisionW) 0.94 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.972 Model 1 Recall: 0.979 Precision: all: 0.575 allw: 0.886 <3: 0.934 <3w: 0.946 F-measure:(Recall,Precision) 0.725 F-measure:(Recall,PrecisionW) 0.93 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.972 Model 2 Recall: 0.979 Precision: all: 0.573 allw: 0.904 <3: 0.935 <3w: 0.953 F-measure:(Recall,Precision) 0.723 F-measure:(Recall,PrecisionW) 0.94 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.976 Model 3 Recall: 0.977 Precision: all: 0.572 allw: 0.897 <3: 0.935 <3w: 0.945 F-measure:(Recall,Precision) 0.721 F-measure:(Recall,PrecisionW) 0.935 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.972 Model 4 Recall: 0.978 Precision: all: 0.577 allw: 0.886 <3: 0.935 <3w: 0.955 F-measure:(Recall,Precision) 0.726 F-measure:(Recall,PrecisionW) 0.93 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.977 Model 5 Recall: 0.983 Precision: all: 0.568 allw: 0.893 <3: 0.935 <3w: 0.94 F-measure:(Recall,Precision) 0.72 F-measure:(Recall,PrecisionW) 0.936 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.969 Model 6 Recall: 0.977 Precision: all: 0.575 allw: 0.893 <3: 0.934 <3w: 0.961 F-measure:(Recall,Precision) 0.724 F-measure:(Recall,PrecisionW) 0.933 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.98 Model 7 Recall: 0.982 Precision: all: 0.572 allw: 0.893 <3: 0.935 <3w: 0.941 F-measure:(Recall,Precision) 0.723 F-measure:(Recall,PrecisionW) 0.936 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.97 Model 8 Recall: 0.978 Precision: all: 0.566 allw: 0.892 <3: 0.934 <3w: 0.943 F-measure:(Recall,Precision) 0.717 F-measure:(Recall,PrecisionW) 0.933 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.971 Model 9 Recall: 0.984 Precision: all: 0.571 allw: 0.889 <3: 0.934 <3w: 0.954 F-measure:(Recall,Precision) 0.723 F-measure:(Recall,PrecisionW) 0.934 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.977 Model 10 Recall: 0.976 Precision: all: 0.564 allw: 0.896 <3: 0.935 <3w: 0.953 F-measure:(Recall,Precision) 0.715 F-measure:(Recall,PrecisionW) 0.934 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.976 Model 11 Recall: 0.979 Precision: all: 0.566 allw: 0.898 <3: 0.936 <3w: 0.954 F-measure:(Recall,Precision) 0.718 F-measure:(Recall,PrecisionW) 0.937 F-measure:(0,PrecisionIdeal) 0.967 F-measure:(0,PrecisionIdealW) 0.977 Model 12 Recall: 0.972 Precision: all: 0.569 allw: 0.891 <3: 0.934 <3w: 0.952 F-measure:(Recall,Precision) 0.718 F-measure:(Recall,PrecisionW) 0.93 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.975 Model 13 Recall: 0.977 Precision: all: 0.568 allw: 0.9 <3: 0.934 <3w: 0.958 F-measure:(Recall,Precision) 0.718 F-measure:(Recall,PrecisionW) 0.937 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.979 Model 14 Recall: 0.979 Precision: all: 0.567 allw: 0.892 <3: 0.935 <3w: 0.946 F-measure:(Recall,Precision) 0.718 F-measure:(Recall,PrecisionW) 0.934 F-measure:(0,PrecisionIdeal) 0.967 F-measure:(0,PrecisionIdealW) 0.972 Model 15 Recall: 0.973 Precision: all: 0.573 allw: 0.899 <3: 0.934 <3w: 0.955 F-measure:(Recall,Precision) 0.722 F-measure:(Recall,PrecisionW) 0.934 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.977 Model 16 Recall: 0.981 Precision: all: 0.571 allw: 0.898 <3: 0.935 <3w: 0.949 F-measure:(Recall,Precision) 0.721 F-measure:(Recall,PrecisionW) 0.937 F-measure:(0,PrecisionIdeal) 0.967 F-measure:(0,PrecisionIdealW) 0.974 Model 17 Recall: 0.979 Precision: all: 0.571 allw: 0.886 <3: 0.934 <3w: 0.94 F-measure:(Recall,Precision) 0.722 F-measure:(Recall,PrecisionW) 0.931 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.969 Model 18 Recall: 0.983 Precision: all: 0.576 allw: 0.884 <3: 0.935 <3w: 0.953 F-measure:(Recall,Precision) 0.727 F-measure:(Recall,PrecisionW) 0.931 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.976 Model 19 Recall: 0.982 Precision: all: 0.574 allw: 0.903 <3: 0.935 <3w: 0.953 F-measure:(Recall,Precision) 0.724 F-measure:(Recall,PrecisionW) 0.941 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.976 Model 20 Recall: 0.981 Precision: all: 0.574 allw: 0.889 <3: 0.935 <3w: 0.952 F-measure:(Recall,Precision) 0.724 F-measure:(Recall,PrecisionW) 0.932 F-measure:(0,PrecisionIdeal) 0.966 F-measure:(0,PrecisionIdealW) 0.975 For freely-rotating-chain model: Model ave Inconsistent score: 0.252(208/826) Model ave Missing interactions: 0.247 (198/803) weighted: 0.114 (5.62e+04/4.94e+05) <3: 0.0659 (11/167) <3w: 0.059 (1.67e+04/2.83e+05) Recall: 0.748 Precision: all: 0.753 allw: 0.886 F-measure:(RecallFree,PrecisionFree) 0.751 F-measure:(ReallFree,PrecisionFreeW) 0.811 # Summary for c_aro.peaks Total simulated peaks: 5 Number of peaks NOT matched in the Peak List: 1 M score = 0.2 Average shift in HX: 0.002 Average ab-shift in HX: 0.0033(Assignment used: 3) Average shift in X: 0.037 Average ab-shift in X: 0.037(Assignment used: 3) Average shift in HX2: -0.011 Average ab-shift in HX2: 0.015(Assignment used: 4) #For peaklist c_aro.peaks: Rmax: 5 Model ave Inconsistent score: 0.0769(4/52) Model 1 Inconsistent score: 0.0385(2/52) Model 2 Inconsistent score: 0.0577(3/52) Model 3 Inconsistent score: 0.0577(3/52) Model 4 Inconsistent score: 0.115(6/52) Model 5 Inconsistent score: 0.0577(3/52) Model 6 Inconsistent score: 0.0577(3/52) Model 7 Inconsistent score: 0.0577(3/52) Model 8 Inconsistent score: 0.0385(2/52) Model 9 Inconsistent score: 0.0577(3/52) Model 10 Inconsistent score: 0.0577(3/52) Model 11 Inconsistent score: 0.0385(2/52) Model 12 Inconsistent score: 0.0769(4/52) Model 13 Inconsistent score: 0.0769(4/52) Model 14 Inconsistent score: 0.0577(3/52) Model 15 Inconsistent score: 0.0962(5/52) Model 16 Inconsistent score: 0.0385(2/52) Model 17 Inconsistent score: 0.0577(3/52) Model 18 Inconsistent score: 0.135(7/52) Model 19 Inconsistent score: 0.0577(3/52) Model 20 Inconsistent score: 0.0769(4/52) Model ave Missing interactions: 0.548 (68/124) weighted: 0.231 (2.23e+04/9.66e+04) <3: nan (0/0) <3w: nan (0/0) Model 1 Missing interactions: 0.57 (81/142) weighted: 0.216 (4.08e+04/1.89e+05) <3: nan (0/0) <3w: nan (0/0) Model 2 Missing interactions: 0.569 (74/130) weighted: 0.239 (2.42e+04/1.01e+05) <3: nan (0/0) <3w: nan (0/0) Model 3 Missing interactions: 0.581 (75/129) weighted: 0.171 (2.33e+04/1.37e+05) <3: nan (0/0) <3w: nan (0/0) Model 4 Missing interactions: 0.594 (76/128) weighted: 0.217 (2.78e+04/1.28e+05) <3: nan (0/0) <3w: nan (0/0) Model 5 Missing interactions: 0.575 (77/134) weighted: 0.243 (2.94e+04/1.21e+05) <3: nan (0/0) <3w: nan (0/0) Model 6 Missing interactions: 0.569 (78/137) weighted: 0.228 (2.9e+04/1.27e+05) <3: nan (0/0) <3w: nan (0/0) Model 7 Missing interactions: 0.588 (77/131) weighted: 0.187 (2.26e+04/1.21e+05) <3: nan (0/0) <3w: nan (0/0) Model 8 Missing interactions: 0.564 (75/133) weighted: 0.223 (2.77e+04/1.24e+05) <3: nan (0/0) <3w: nan (0/0) Model 9 Missing interactions: 0.576 (80/139) weighted: 0.252 (3.79e+04/1.5e+05) <3: nan (0/0) <3w: nan (0/0) Model 10 Missing interactions: 0.583 (81/139) weighted: 0.243 (3.33e+04/1.37e+05) <3: nan (0/0) <3w: nan (0/0) Model 11 Missing interactions: 0.567 (76/134) weighted: 0.175 (2.7e+04/1.55e+05) <3: nan (0/0) <3w: nan (0/0) Model 12 Missing interactions: 0.562 (72/128) weighted: 0.26 (3.29e+04/1.27e+05) <3: nan (0/0) <3w: nan (0/0) Model 13 Missing interactions: 0.587 (81/138) weighted: 0.202 (2.94e+04/1.46e+05) <3: nan (0/0) <3w: nan (0/0) Model 14 Missing interactions: 0.578 (78/135) weighted: 0.193 (2.74e+04/1.42e+05) <3: nan (0/0) <3w: nan (0/0) Model 15 Missing interactions: 0.569 (70/123) weighted: 0.243 (3.2e+04/1.32e+05) <3: nan (0/0) <3w: nan (0/0) Model 16 Missing interactions: 0.555 (76/137) weighted: 0.304 (4.62e+04/1.52e+05) <3: nan (0/0) <3w: nan (0/0) Model 17 Missing interactions: 0.576 (80/139) weighted: 0.288 (4.01e+04/1.39e+05) <3: nan (0/0) <3w: nan (0/0) Model 18 Missing interactions: 0.568 (71/125) weighted: 0.22 (2.41e+04/1.09e+05) <3: nan (0/0) <3w: nan (0/0) Model 19 Missing interactions: 0.556 (75/135) weighted: 0.237 (2.84e+04/1.19e+05) <3: nan (0/0) <3w: nan (0/0) Model 20 Missing interactions: 0.577 (79/137) weighted: 0.226 (2.89e+04/1.28e+05) <3: nan (0/0) <3w: nan (0/0) Model ave Recall: 0.923 Precision: all: 0.452 allw: 0.769 <3: nan <3w: nan F-measure:(Recall,Precision) 0.606 F-measure:(Recall,PrecisionW) 0.839 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 1 Recall: 0.962 Precision: all: 0.43 allw: 0.784 <3: nan <3w: nan F-measure:(Recall,Precision) 0.594 F-measure:(Recall,PrecisionW) 0.864 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 2 Recall: 0.942 Precision: all: 0.431 allw: 0.761 <3: nan <3w: nan F-measure:(Recall,Precision) 0.591 F-measure:(Recall,PrecisionW) 0.842 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 3 Recall: 0.942 Precision: all: 0.419 allw: 0.829 <3: nan <3w: nan F-measure:(Recall,Precision) 0.58 F-measure:(Recall,PrecisionW) 0.882 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 4 Recall: 0.885 Precision: all: 0.406 allw: 0.783 <3: nan <3w: nan F-measure:(Recall,Precision) 0.557 F-measure:(Recall,PrecisionW) 0.831 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 5 Recall: 0.942 Precision: all: 0.425 allw: 0.757 <3: nan <3w: nan F-measure:(Recall,Precision) 0.586 F-measure:(Recall,PrecisionW) 0.839 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 6 Recall: 0.942 Precision: all: 0.431 allw: 0.772 <3: nan <3w: nan F-measure:(Recall,Precision) 0.591 F-measure:(Recall,PrecisionW) 0.849 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 7 Recall: 0.942 Precision: all: 0.412 allw: 0.813 <3: nan <3w: nan F-measure:(Recall,Precision) 0.574 F-measure:(Recall,PrecisionW) 0.873 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 8 Recall: 0.962 Precision: all: 0.436 allw: 0.777 <3: nan <3w: nan F-measure:(Recall,Precision) 0.6 F-measure:(Recall,PrecisionW) 0.859 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 9 Recall: 0.942 Precision: all: 0.424 allw: 0.748 <3: nan <3w: nan F-measure:(Recall,Precision) 0.585 F-measure:(Recall,PrecisionW) 0.834 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 10 Recall: 0.942 Precision: all: 0.417 allw: 0.757 <3: nan <3w: nan F-measure:(Recall,Precision) 0.578 F-measure:(Recall,PrecisionW) 0.84 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 11 Recall: 0.962 Precision: all: 0.433 allw: 0.825 <3: nan <3w: nan F-measure:(Recall,Precision) 0.597 F-measure:(Recall,PrecisionW) 0.888 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 12 Recall: 0.923 Precision: all: 0.438 allw: 0.74 <3: nan <3w: nan F-measure:(Recall,Precision) 0.594 F-measure:(Recall,PrecisionW) 0.821 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 13 Recall: 0.923 Precision: all: 0.413 allw: 0.798 <3: nan <3w: nan F-measure:(Recall,Precision) 0.571 F-measure:(Recall,PrecisionW) 0.856 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 14 Recall: 0.942 Precision: all: 0.422 allw: 0.807 <3: nan <3w: nan F-measure:(Recall,Precision) 0.583 F-measure:(Recall,PrecisionW) 0.87 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 15 Recall: 0.904 Precision: all: 0.431 allw: 0.757 <3: nan <3w: nan F-measure:(Recall,Precision) 0.584 F-measure:(Recall,PrecisionW) 0.824 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 16 Recall: 0.962 Precision: all: 0.445 allw: 0.696 <3: nan <3w: nan F-measure:(Recall,Precision) 0.609 F-measure:(Recall,PrecisionW) 0.807 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 17 Recall: 0.942 Precision: all: 0.424 allw: 0.712 <3: nan <3w: nan F-measure:(Recall,Precision) 0.585 F-measure:(Recall,PrecisionW) 0.811 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 18 Recall: 0.865 Precision: all: 0.432 allw: 0.78 <3: nan <3w: nan F-measure:(Recall,Precision) 0.576 F-measure:(Recall,PrecisionW) 0.82 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 19 Recall: 0.942 Precision: all: 0.444 allw: 0.763 <3: nan <3w: nan F-measure:(Recall,Precision) 0.604 F-measure:(Recall,PrecisionW) 0.843 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan Model 20 Recall: 0.923 Precision: all: 0.423 allw: 0.774 <3: nan <3w: nan F-measure:(Recall,Precision) 0.58 F-measure:(Recall,PrecisionW) 0.842 F-measure:(0,PrecisionIdeal) nan F-measure:(0,PrecisionIdealW) nan For freely-rotating-chain model: Model ave Inconsistent score: 0.769(40/52) Model ave Missing interactions: 0.526 (10/19) weighted: 0.441 (1.27e+03/2.87e+03) <3: nan (0/0) <3w: nan (0/0) Recall: 0.231 Precision: all: 0.474 allw: 0.559 F-measure:(RecallFree,PrecisionFree) 0.31 F-measure:(ReallFree,PrecisionFreeW) 0.327 # Summary for c_ali.peaks Total simulated peaks: 650 Number of peaks NOT matched in the Peak List: 150 M score = 0.23 Average shift in HX: 0.006 Average ab-shift in HX: 0.0083(Assignment used: 278) Average shift in X: 0.05 Average ab-shift in X: 0.081(Assignment used: 238) Average shift in HX2: 0.0081 Average ab-shift in HX2: 0.013(Assignment used: 291) #For peaklist c_ali.peaks: Rmax: 5 Model ave Inconsistent score: 0.0636(124/1951) Model 1 Inconsistent score: 0.0733(143/1951) Model 2 Inconsistent score: 0.0753(147/1951) Model 3 Inconsistent score: 0.0712(139/1951) Model 4 Inconsistent score: 0.0723(141/1951) Model 5 Inconsistent score: 0.0712(139/1951) Model 6 Inconsistent score: 0.0784(153/1951) Model 7 Inconsistent score: 0.0728(142/1951) Model 8 Inconsistent score: 0.0712(139/1951) Model 9 Inconsistent score: 0.0728(142/1951) Model 10 Inconsistent score: 0.0723(141/1951) Model 11 Inconsistent score: 0.0707(138/1951) Model 12 Inconsistent score: 0.0743(145/1951) Model 13 Inconsistent score: 0.0753(147/1951) Model 14 Inconsistent score: 0.0753(147/1951) Model 15 Inconsistent score: 0.0789(154/1951) Model 16 Inconsistent score: 0.0707(138/1951) Model 17 Inconsistent score: 0.0728(142/1951) Model 18 Inconsistent score: 0.0748(146/1951) Model 19 Inconsistent score: 0.0702(137/1951) Model 20 Inconsistent score: 0.0712(139/1951) Model ave Missing interactions: 0.455 (1.71e+03/3761) weighted: 0.162 (1.55e+06/9.57e+06) <3: 0.151 (78/517) <3w: 0.107 (6.14e+05/5.74e+06) Model 1 Missing interactions: 0.47 (1.83e+03/3899) weighted: 0.18 (1.97e+06/1.1e+07) <3: 0.151 (78/517) <3w: 0.109 (6.38e+05/5.88e+06) Model 2 Missing interactions: 0.468 (1.8e+03/3838) weighted: 0.174 (1.85e+06/1.07e+07) <3: 0.15 (78/520) <3w: 0.107 (6.28e+05/5.9e+06) Model 3 Missing interactions: 0.465 (1.77e+03/3808) weighted: 0.172 (1.81e+06/1.05e+07) <3: 0.15 (78/520) <3w: 0.108 (6.29e+05/5.81e+06) Model 4 Missing interactions: 0.473 (1.86e+03/3927) weighted: 0.176 (1.92e+06/1.09e+07) <3: 0.151 (78/518) <3w: 0.106 (6.35e+05/5.99e+06) Model 5 Missing interactions: 0.474 (1.87e+03/3942) weighted: 0.186 (2.05e+06/1.1e+07) <3: 0.15 (78/520) <3w: 0.11 (6.57e+05/5.99e+06) Model 6 Missing interactions: 0.467 (1.78e+03/3814) weighted: 0.167 (1.74e+06/1.04e+07) <3: 0.151 (78/517) <3w: 0.102 (6.03e+05/5.9e+06) Model 7 Missing interactions: 0.464 (1.79e+03/3847) weighted: 0.177 (1.87e+06/1.06e+07) <3: 0.151 (78/518) <3w: 0.109 (6.45e+05/5.89e+06) Model 8 Missing interactions: 0.469 (1.83e+03/3898) weighted: 0.183 (1.98e+06/1.08e+07) <3: 0.151 (78/515) <3w: 0.109 (6.44e+05/5.89e+06) Model 9 Missing interactions: 0.478 (1.89e+03/3962) weighted: 0.183 (2.03e+06/1.11e+07) <3: 0.151 (78/516) <3w: 0.106 (6.36e+05/6.02e+06) Model 10 Missing interactions: 0.48 (1.91e+03/3969) weighted: 0.183 (1.99e+06/1.09e+07) <3: 0.15 (78/519) <3w: 0.106 (6.19e+05/5.83e+06) Model 11 Missing interactions: 0.477 (1.89e+03/3963) weighted: 0.178 (1.95e+06/1.1e+07) <3: 0.15 (78/520) <3w: 0.108 (6.34e+05/5.89e+06) Model 12 Missing interactions: 0.475 (1.86e+03/3913) weighted: 0.177 (1.89e+06/1.07e+07) <3: 0.151 (78/517) <3w: 0.104 (6.13e+05/5.91e+06) Model 13 Missing interactions: 0.474 (1.86e+03/3924) weighted: 0.179 (1.93e+06/1.08e+07) <3: 0.151 (78/516) <3w: 0.103 (6.1e+05/5.89e+06) Model 14 Missing interactions: 0.478 (1.87e+03/3920) weighted: 0.19 (2.07e+06/1.09e+07) <3: 0.15 (78/519) <3w: 0.109 (6.4e+05/5.86e+06) Model 15 Missing interactions: 0.467 (1.76e+03/3769) weighted: 0.174 (1.84e+06/1.06e+07) <3: 0.151 (78/516) <3w: 0.103 (6.02e+05/5.86e+06) Model 16 Missing interactions: 0.479 (1.88e+03/3928) weighted: 0.178 (1.91e+06/1.08e+07) <3: 0.15 (78/519) <3w: 0.11 (6.39e+05/5.83e+06) Model 17 Missing interactions: 0.471 (1.84e+03/3895) weighted: 0.18 (1.95e+06/1.09e+07) <3: 0.151 (78/517) <3w: 0.106 (6.16e+05/5.82e+06) Model 18 Missing interactions: 0.469 (1.81e+03/3861) weighted: 0.185 (1.98e+06/1.07e+07) <3: 0.151 (78/518) <3w: 0.106 (6.19e+05/5.86e+06) Model 19 Missing interactions: 0.475 (1.89e+03/3970) weighted: 0.182 (2.01e+06/1.1e+07) <3: 0.151 (78/518) <3w: 0.106 (6.19e+05/5.87e+06) Model 20 Missing interactions: 0.468 (1.81e+03/3866) weighted: 0.179 (1.93e+06/1.08e+07) <3: 0.15 (78/519) <3w: 0.104 (6.21e+05/5.98e+06) Model ave Recall: 0.936 Precision: all: 0.545 allw: 0.838 <3: 0.849 <3w: 0.893 F-measure:(Recall,Precision) 0.689 F-measure:(Recall,PrecisionW) 0.884 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.943 Model 1 Recall: 0.927 Precision: all: 0.53 allw: 0.82 <3: 0.849 <3w: 0.891 F-measure:(Recall,Precision) 0.674 F-measure:(Recall,PrecisionW) 0.87 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.943 Model 2 Recall: 0.925 Precision: all: 0.532 allw: 0.826 <3: 0.85 <3w: 0.893 F-measure:(Recall,Precision) 0.675 F-measure:(Recall,PrecisionW) 0.873 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.944 Model 3 Recall: 0.929 Precision: all: 0.535 allw: 0.828 <3: 0.85 <3w: 0.892 F-measure:(Recall,Precision) 0.679 F-measure:(Recall,PrecisionW) 0.875 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.943 Model 4 Recall: 0.928 Precision: all: 0.527 allw: 0.824 <3: 0.849 <3w: 0.894 F-measure:(Recall,Precision) 0.672 F-measure:(Recall,PrecisionW) 0.873 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.944 Model 5 Recall: 0.929 Precision: all: 0.526 allw: 0.814 <3: 0.85 <3w: 0.89 F-measure:(Recall,Precision) 0.672 F-measure:(Recall,PrecisionW) 0.868 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.942 Model 6 Recall: 0.922 Precision: all: 0.533 allw: 0.833 <3: 0.849 <3w: 0.898 F-measure:(Recall,Precision) 0.676 F-measure:(Recall,PrecisionW) 0.875 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.946 Model 7 Recall: 0.927 Precision: all: 0.536 allw: 0.823 <3: 0.849 <3w: 0.891 F-measure:(Recall,Precision) 0.679 F-measure:(Recall,PrecisionW) 0.872 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.942 Model 8 Recall: 0.929 Precision: all: 0.531 allw: 0.817 <3: 0.849 <3w: 0.891 F-measure:(Recall,Precision) 0.675 F-measure:(Recall,PrecisionW) 0.869 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.942 Model 9 Recall: 0.927 Precision: all: 0.522 allw: 0.817 <3: 0.849 <3w: 0.894 F-measure:(Recall,Precision) 0.668 F-measure:(Recall,PrecisionW) 0.868 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.944 Model 10 Recall: 0.928 Precision: all: 0.52 allw: 0.817 <3: 0.85 <3w: 0.894 F-measure:(Recall,Precision) 0.666 F-measure:(Recall,PrecisionW) 0.869 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.944 Model 11 Recall: 0.929 Precision: all: 0.523 allw: 0.822 <3: 0.85 <3w: 0.892 F-measure:(Recall,Precision) 0.669 F-measure:(Recall,PrecisionW) 0.872 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.943 Model 12 Recall: 0.926 Precision: all: 0.525 allw: 0.823 <3: 0.849 <3w: 0.896 F-measure:(Recall,Precision) 0.67 F-measure:(Recall,PrecisionW) 0.871 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.945 Model 13 Recall: 0.925 Precision: all: 0.526 allw: 0.821 <3: 0.849 <3w: 0.897 F-measure:(Recall,Precision) 0.671 F-measure:(Recall,PrecisionW) 0.87 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.945 Model 14 Recall: 0.925 Precision: all: 0.522 allw: 0.81 <3: 0.85 <3w: 0.891 F-measure:(Recall,Precision) 0.667 F-measure:(Recall,PrecisionW) 0.864 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.942 Model 15 Recall: 0.921 Precision: all: 0.533 allw: 0.826 <3: 0.849 <3w: 0.897 F-measure:(Recall,Precision) 0.675 F-measure:(Recall,PrecisionW) 0.871 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.946 Model 16 Recall: 0.929 Precision: all: 0.521 allw: 0.822 <3: 0.85 <3w: 0.89 F-measure:(Recall,Precision) 0.668 F-measure:(Recall,PrecisionW) 0.873 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.942 Model 17 Recall: 0.927 Precision: all: 0.529 allw: 0.82 <3: 0.849 <3w: 0.894 F-measure:(Recall,Precision) 0.673 F-measure:(Recall,PrecisionW) 0.871 F-measure:(0,PrecisionIdeal) 0.918 F-measure:(0,PrecisionIdealW) 0.944 Model 18 Recall: 0.925 Precision: all: 0.531 allw: 0.815 <3: 0.849 <3w: 0.894 F-measure:(Recall,Precision) 0.674 F-measure:(Recall,PrecisionW) 0.867 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.944 Model 19 Recall: 0.93 Precision: all: 0.525 allw: 0.818 <3: 0.849 <3w: 0.894 F-measure:(Recall,Precision) 0.671 F-measure:(Recall,PrecisionW) 0.87 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.944 Model 20 Recall: 0.929 Precision: all: 0.532 allw: 0.821 <3: 0.85 <3w: 0.896 F-measure:(Recall,Precision) 0.676 F-measure:(Recall,PrecisionW) 0.871 F-measure:(0,PrecisionIdeal) 0.919 F-measure:(0,PrecisionIdealW) 0.945 For freely-rotating-chain model: Model ave Inconsistent score: 0.39(761/1951) Model ave Missing interactions: 0.392 (670/1710) weighted: 0.208 (2.7e+05/1.3e+06) <3: 0.151 (78/517) <3w: 0.134 (1.27e+05/9.52e+05) Recall: 0.61 Precision: all: 0.608 allw: 0.792 F-measure:(RecallFree,PrecisionFree) 0.609 F-measure:(ReallFree,PrecisionFreeW) 0.689 Final M-score 0.212 177/833 Model ave Final Recall-score for input query structures: 0.949 Final Precision-score for input query structures: 0.855 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.902 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.899 F-score of ideal true structures: 0.948 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.785 Model 1 Final Recall-score for input query structures: 0.943 Final Precision-score for input query structures: 0.837 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.9 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.886 F-score of ideal true structures: 0.948 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.728 Model 2 Final Recall-score for input query structures: 0.941 Final Precision-score for input query structures: 0.846 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.903 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.891 F-score of ideal true structures: 0.949 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.747 Model 3 Final Recall-score for input query structures: 0.943 Final Precision-score for input query structures: 0.846 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.9 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.892 F-score of ideal true structures: 0.948 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.754 Model 4 Final Recall-score for input query structures: 0.942 Final Precision-score for input query structures: 0.839 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.904 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.888 F-score of ideal true structures: 0.949 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.734 Model 5 Final Recall-score for input query structures: 0.945 Final Precision-score for input query structures: 0.834 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.898 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.886 F-score of ideal true structures: 0.946 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.735 Model 6 Final Recall-score for input query structures: 0.938 Final Precision-score for input query structures: 0.848 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.908 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.891 F-score of ideal true structures: 0.952 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.737 Model 7 Final Recall-score for input query structures: 0.943 Final Precision-score for input query structures: 0.841 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.899 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.89 F-score of ideal true structures: 0.947 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.749 Model 8 Final Recall-score for input query structures: 0.944 Final Precision-score for input query structures: 0.836 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.899 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.887 F-score of ideal true structures: 0.947 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.736 Model 9 Final Recall-score for input query structures: 0.944 Final Precision-score for input query structures: 0.835 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.904 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.886 F-score of ideal true structures: 0.95 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.722 Model 10 Final Recall-score for input query structures: 0.942 Final Precision-score for input query structures: 0.837 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.903 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.886 F-score of ideal true structures: 0.949 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.725 Model 11 Final Recall-score for input query structures: 0.945 Final Precision-score for input query structures: 0.842 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.902 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.89 F-score of ideal true structures: 0.949 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.742 Model 12 Final Recall-score for input query structures: 0.939 Final Precision-score for input query structures: 0.84 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.905 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.887 F-score of ideal true structures: 0.95 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.726 Model 13 Final Recall-score for input query structures: 0.94 Final Precision-score for input query structures: 0.841 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.906 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.888 F-score of ideal true structures: 0.951 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.727 Model 14 Final Recall-score for input query structures: 0.941 Final Precision-score for input query structures: 0.831 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.9 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.883 F-score of ideal true structures: 0.947 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.718 Model 15 Final Recall-score for input query structures: 0.936 Final Precision-score for input query structures: 0.845 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.907 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.888 F-score of ideal true structures: 0.951 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.727 Model 16 Final Recall-score for input query structures: 0.945 Final Precision-score for input query structures: 0.84 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.9 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.89 F-score of ideal true structures: 0.947 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.749 Model 17 Final Recall-score for input query structures: 0.943 Final Precision-score for input query structures: 0.836 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.902 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.886 F-score of ideal true structures: 0.948 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.728 Model 18 Final Recall-score for input query structures: 0.941 Final Precision-score for input query structures: 0.833 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.904 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.884 F-score of ideal true structures: 0.949 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.716 Model 19 Final Recall-score for input query structures: 0.945 Final Precision-score for input query structures: 0.839 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.904 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.889 F-score of ideal true structures: 0.95 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.735 Model 20 Final Recall-score for input query structures: 0.944 Final Precision-score for input query structures: 0.838 Final Recall-score for ideal true structures: 1 Final Precision-score for ideal true structures: 0.905 Final Recall-score for freely-rotating-chain model: 0.643 Final Precision-score for freely-rotating-chain model: 0.818 Summary: F-score of input query structures: 0.888 F-score of ideal true structures: 0.95 F-score of freely-rotating-chain model: 0.72 DP-Score: 0.73 Statistics: =========== NOESY_Assign: User CPU Time: 76.5 sec. Syst CPU Time: 0.73 sec. Other Processes: User CPU Time: 0.68 sec. Syst CPU Time: 0.07 sec. Total Elapsed Time: 78 sec.