read coor pdb LKR112_R3Cons_em_bcr3.pdb
all
rmsd coor heavy 7A-37A,41A-48A,51A-92A,96A-98A
ave
resOrd_rmsd_heavy
rmsd coor backbone 7A-37A,41A-48A,51A-92A,96A-98A
ave
resOrd_rmsd_bb
write
best.pdb
coor
all
all
pdb
quit