Running PDBSTAT from Linux 
  Ayuda is on: /farm/software/PdbStat/PdbStat-5.7

  (C)
  (C)  Pdbstat -- A program to evaluate some statistics of macromolecules,
  (C)             given the cartesian coordinates.
  (C)
  (C)  (c) Copyright 1992-2012 Roberto Tejero and Gaetano T. Montelione
  (C)      Center for Advanced Technology and Medicine (CABM)
  (C)      Rutgers University
  (C)
       ** VERSION:  5.7-exp dom mar 10 23:17:04 UTC 2013  ** 
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
       ===============>  W E L C O M E  to PDBStat <================   
 PDBStat has become a tool able (between other things) of:
    a) read and interconvert between DISMAN, DYANA, PDB, DISCOVER, IMPACT 
    b) elaborate some info about the molecule as MW, Radius of gyration, .. 
    c) investigate the setereochemical quality of a protein by evaluating 
       phi, psi, chi1, impropers and chirality 
 The sequence of acts should be: 
       1.- read a file (coords, constr) 
       2.- read a sequence file (can be free format) 
       3.- Follow menu (calculating, writing ...) 

   NOTE: Be aware that if you read in a constraint file you 
         *ALWAYS* need to read a sequence file also

 HAVE FUN AND ENJOY !!
 **** For more info type `help' or `menu' **** 

  --> ... Reading/Loading Distances file  ...  125 distance records read
  --> ... Reading/Loading Dihedral Library .. 1119 library records read

PdbStat> [rea]d [hel]p [his]tory [men]u [phi] [qui]t...

PdbStat>  leyendo PDB 
  > locate_file(): file `LKR112_R3Cons_em_bcr3.pdb' opened for reading 
  > ReadCoordsPdb(): >> EXPDTA     NMR, 21 STRUCTURES
  > ReadCoordsPdb(): >> REMARK   PdbStat --  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  > ReadCoordsPdb(): >> REMARK   PdbStat --  PDB COORDINATES FOR TEMP_BCM_111.PDB, 20 MODEL/S  TEMP_BCM_111.PDB  
  > ReadCoordsPdb(): >> REMARK   PdbStat --  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  > ReadCoordsPdb(): >> SEQRES   1 A  114  MET LYS ASN THR GLY ASP GLU VAL VAL ALA ILE ILE SER 
   1  > ReadCoordsPdb(): Counting models in file `LKR112_R3Cons_em_bcr3.pdb'; Model:    2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
  > ReadCoordsPdb(): After scanning there is(are) 20 model(s) 
  > ReadCoordsPdb(): what model do you want [(1 to 20) or all] ?_   > ReadCoordsPdb(): I'm reading file LKR112_R3Cons_em_bcr3.pdb MODEL     1 

  > ReadCoordsPdb(): *** SUMMARY ***
  > ReadCoordsPdb(): -->  1795 ATOM records read from file 
  > ReadCoordsPdb(): -->  1795 Regular IUPAC Atoms 
  > ReadCoordsPdb(): -->     0 Pseudo-atoms (DISMAN type) 
  > ReadCoordsPdb(): -->     0 Lone pairs
  > ReadCoordsPdb(): Bye ... 
  > =============================== INFO ================================ 
  > INFO_mol: # atoms:     1795 (558 C, 897 H, 172 O, 164 N, 4 S, 0 Q, 0 Metals)
  > INFO_mol: # residues:     114 (Avg. mol. weight: 112.1)
  > INFO_mol: # -- M.W. : 12783.3 g/mol. (12.78 kD)     Estimated RoG <S2>:  13.31 
  > INFO_mol: CenterMass() -- Working PDB model 1 in file, model no. 1 
  > INFO_mol: CenterMass() -- Molecule `LKR112_R3Cons_em_bcr3.pdb' model #1, TOTAL RESIDUES: 114
  > INFO_mol: Radius of Gyration <S2> :    14.6719  angstroms 
  > INFO_mol: Center of Masses: x_cm(15.226), y_cm(-6.963), z_cm(18.737) 

  > INFO_res:  MKNTGDEVVA IISQNGKVIR EIPLTGHKGN EQFTIKGKGA QYNLMEVDGE 
  > INFO_res:  RIRIKEDNSP DQVGVKMGWK SKAGDTIVCL PHKVFVEIKS TQKDSKDPDT 
  > INFO_res:  DLIVPNLEHH HHHH
  > INFO_res:  
  > INFO_res:  MET  LYS  ASN  THR  GLY  ASP  GLU  VAL  VAL  ALA  ILE  ILE  
  > INFO_res:  SER  GLN  ASN  GLY  LYS  VAL  ILE  ARG  GLU  ILE  PRO  LEU  
  > INFO_res:  THR  GLY  HIS  LYS  GLY  ASN  GLU  GLN  PHE  THR  ILE  LYS  
  > INFO_res:  GLY  LYS  GLY  ALA  GLN  TYR  ASN  LEU  MET  GLU  VAL  ASP  
  > INFO_res:  GLY  GLU  ARG  ILE  ARG  ILE  LYS  GLU  ASP  ASN  SER  PRO  
  > INFO_res:  ASP  GLN  VAL  GLY  VAL  LYS  MET  GLY  TRP  LYS  SER  LYS  
  > INFO_res:  ALA  GLY  ASP  THR  ILE  VAL  CYS  LEU  PRO  HIS  LYS  VAL  
  > INFO_res:  PHE  VAL  GLU  ILE  LYS  SER  THR  GLN  LYS  ASP  SER  LYS  
  > INFO_res:  ASP  PRO  ASP  THR  ASP  LEU  ILE  VAL  PRO  ASN  LEU  GLU  
  > INFO_res:  HIS  HIS  HIS  HIS  HIS  HIS  
  > INFO_res:  
  > INFO_res:   3 ALA     3 ARG     6 ASN     9 ASP     1 CYS     5 GLN  
  > INFO_res:   8 GLU    10 GLY     8 HIS    10 ILE     5 LEU    13 LYS  
  > INFO_res:   3 MET     2 PHE     5 PRO     5 SER     6 THR     1 TYR  
  > INFO_res:   1 TRP    10 VAL  
  > INFO_res: DISULFIDE: ** NO INFO FOR DISULFIDES IN FILE 
  > ===================================================================== 
  > ReadCoordsPdb():  *** monomer, 1 [1] chains *** 


PdbStat>   > locate_file(): file `temp.mr' opened for reading 
       0 SANI-RDC constraints read 
      94 ACO (dihedral) constraints read 
    2747 NOE-distance constraints (0 Ambiguous NOE/s) read 
    2841 TOTAL constraints read 


PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER_constr: Output format (congen | discover | impact | disman | diana | xplor | cns | rosetta)? :