PyMOL>load ./HR5546A_R3Cons_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./HR5546A_R3Cons_em_bcr3.pdb.iupac" loaded as "HR5546A_R3Cons_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 1897 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color14, [0, 1, 255] Color: "color14" defined as [ 0.000, 0.004, 1.000 ]. PyMOL>color color14, resi 14 Executive: Colored 14 atoms. PyMOL>set_color color16, [0, 123, 255] Color: "color16" defined as [ 0.000, 0.482, 1.000 ]. PyMOL>color color16, resi 16 Executive: Colored 11 atoms. PyMOL>set_color color17, [0, 255, 209] Color: "color17" defined as [ 0.000, 1.000, 0.820 ]. PyMOL>color color17, resi 17 Executive: Colored 19 atoms. PyMOL>set_color color18, [0, 165, 255] Color: "color18" defined as [ 0.000, 0.647, 1.000 ]. PyMOL>color color18, resi 18 Executive: Colored 15 atoms. PyMOL>set_color color19, [0, 1, 255] Color: "color19" defined as [ 0.000, 0.004, 1.000 ]. PyMOL>color color19, resi 19 Executive: Colored 15 atoms. PyMOL>set_color color20, [77, 255, 0] Color: "color20" defined as [ 0.302, 1.000, 0.000 ]. PyMOL>color color20, resi 20 Executive: Colored 19 atoms. PyMOL>set_color color23, [0, 170, 255] Color: "color23" defined as [ 0.000, 0.667, 1.000 ]. PyMOL>color color23, resi 23 Executive: Colored 12 atoms. PyMOL>set_color color25, [165, 255, 0] Color: "color25" defined as [ 0.647, 1.000, 0.000 ]. PyMOL>color color25, resi 25 Executive: Colored 22 atoms. PyMOL>set_color color26, [0, 255, 10] Color: "color26" defined as [ 0.000, 1.000, 0.039 ]. PyMOL>color color26, resi 26 Executive: Colored 20 atoms. PyMOL>set_color color27, [102, 255, 0] Color: "color27" defined as [ 0.400, 1.000, 0.000 ]. PyMOL>color color27, resi 27 Executive: Colored 19 atoms. PyMOL>set_color color28, [0, 255, 55] Color: "color28" defined as [ 0.000, 1.000, 0.216 ]. PyMOL>color color28, resi 28 Executive: Colored 24 atoms. PyMOL>set_color color29, [0, 245, 255] Color: "color29" defined as [ 0.000, 0.961, 1.000 ]. PyMOL>color color29, resi 29 Executive: Colored 19 atoms. PyMOL>set_color color30, [0, 255, 151] Color: "color30" defined as [ 0.000, 1.000, 0.592 ]. PyMOL>color color30, resi 30 Executive: Colored 22 atoms. PyMOL>set_color color31, [0, 12, 255] Color: "color31" defined as [ 0.000, 0.047, 1.000 ]. PyMOL>color color31, resi 31 Executive: Colored 14 atoms. PyMOL>set_color color33, [0, 65, 255] Color: "color33" defined as [ 0.000, 0.255, 1.000 ]. PyMOL>color color33, resi 33 Executive: Colored 11 atoms. PyMOL>set_color color38, [0, 22, 255] Color: "color38" defined as [ 0.000, 0.086, 1.000 ]. PyMOL>color color38, resi 38 Executive: Colored 14 atoms. PyMOL>set_color color42, [0, 209, 255] Color: "color42" defined as [ 0.000, 0.820, 1.000 ]. PyMOL>color color42, resi 42 Executive: Colored 24 atoms. PyMOL>set_color color43, [0, 255, 224] Color: "color43" defined as [ 0.000, 1.000, 0.878 ]. PyMOL>color color43, resi 43 Executive: Colored 15 atoms. PyMOL>set_color color44, [0, 11, 255] Color: "color44" defined as [ 0.000, 0.043, 1.000 ]. PyMOL>color color44, resi 44 Executive: Colored 17 atoms. PyMOL>set_color color46, [0, 255, 60] Color: "color46" defined as [ 0.000, 1.000, 0.235 ]. PyMOL>color color46, resi 46 Executive: Colored 24 atoms. PyMOL>set_color color55, [0, 255, 128] Color: "color55" defined as [ 0.000, 1.000, 0.502 ]. PyMOL>color color55, resi 55 Executive: Colored 21 atoms. PyMOL>set_color color56, [0, 38, 255] Color: "color56" defined as [ 0.000, 0.149, 1.000 ]. PyMOL>color color56, resi 56 Executive: Colored 22 atoms. PyMOL>set_color color57, [0, 255, 39] Color: "color57" defined as [ 0.000, 1.000, 0.153 ]. PyMOL>color color57, resi 57 Executive: Colored 21 atoms. PyMOL>set_color color62, [0, 69, 255] Color: "color62" defined as [ 0.000, 0.271, 1.000 ]. PyMOL>color color62, resi 62 Executive: Colored 16 atoms. PyMOL>set_color color63, [0, 68, 255] Color: "color63" defined as [ 0.000, 0.267, 1.000 ]. PyMOL>color color63, resi 63 Executive: Colored 19 atoms. PyMOL>set_color color64, [0, 35, 255] Color: "color64" defined as [ 0.000, 0.137, 1.000 ]. PyMOL>color color64, resi 64 Executive: Colored 22 atoms. PyMOL>set_color color66, [0, 67, 255] Color: "color66" defined as [ 0.000, 0.263, 1.000 ]. PyMOL>color color66, resi 66 Executive: Colored 7 atoms. PyMOL>set_color color67, [0, 68, 255] Color: "color67" defined as [ 0.000, 0.267, 1.000 ]. PyMOL>color color67, resi 67 Executive: Colored 17 atoms. PyMOL>set_color color68, [0, 65, 255] Color: "color68" defined as [ 0.000, 0.255, 1.000 ]. PyMOL>color color68, resi 68 Executive: Colored 14 atoms. PyMOL>set_color color69, [0, 70, 255] Color: "color69" defined as [ 0.000, 0.275, 1.000 ]. PyMOL>color color69, resi 69 Executive: Colored 16 atoms. PyMOL>set_color color70, [0, 255, 226] Color: "color70" defined as [ 0.000, 1.000, 0.886 ]. PyMOL>color color70, resi 70 Executive: Colored 14 atoms. PyMOL>set_color color71, [0, 255, 225] Color: "color71" defined as [ 0.000, 1.000, 0.882 ]. PyMOL>color color71, resi 71 Executive: Colored 19 atoms. PyMOL>set_color color72, [33, 255, 0] Color: "color72" defined as [ 0.129, 1.000, 0.000 ]. PyMOL>color color72, resi 72 Executive: Colored 24 atoms. PyMOL>set_color color78, [0, 148, 255] Color: "color78" defined as [ 0.000, 0.580, 1.000 ]. PyMOL>color color78, resi 78 Executive: Colored 16 atoms. PyMOL>set_color color86, [0, 252, 255] Color: "color86" defined as [ 0.000, 0.988, 1.000 ]. PyMOL>color color86, resi 86 Executive: Colored 19 atoms. PyMOL>set_color color87, [0, 240, 255] Color: "color87" defined as [ 0.000, 0.941, 1.000 ]. PyMOL>color color87, resi 87 Executive: Colored 19 atoms. PyMOL>set_color color88, [0, 255, 89] Color: "color88" defined as [ 0.000, 1.000, 0.349 ]. PyMOL>color color88, resi 88 Executive: Colored 24 atoms. PyMOL>set_color color90, [0, 19, 255] Color: "color90" defined as [ 0.000, 0.075, 1.000 ]. PyMOL>color color90, resi 90 Executive: Colored 14 atoms. PyMOL>set_color color94, [0, 102, 255] Color: "color94" defined as [ 0.000, 0.400, 1.000 ]. PyMOL>color color94, resi 94 Executive: Colored 24 atoms. PyMOL>set_color color100, [0, 76, 255] Color: "color100" defined as [ 0.000, 0.298, 1.000 ]. PyMOL>color color100, resi 100 Executive: Colored 16 atoms. PyMOL>set_color color101, [0, 255, 145] Color: "color101" defined as [ 0.000, 1.000, 0.569 ]. PyMOL>color color101, resi 101 Executive: Colored 22 atoms. PyMOL>set_color color102, [0, 107, 255] Color: "color102" defined as [ 0.000, 0.420, 1.000 ]. PyMOL>color color102, resi 102 Executive: Colored 16 atoms. PyMOL>set_color color103, [0, 53, 255] Color: "color103" defined as [ 0.000, 0.208, 1.000 ]. PyMOL>color color103, resi 103 Executive: Colored 19 atoms. PyMOL>set_color color104, [0, 255, 28] Color: "color104" defined as [ 0.000, 1.000, 0.110 ]. PyMOL>color color104, resi 104 Executive: Colored 19 atoms. PyMOL>set_color color105, [0, 255, 169] Color: "color105" defined as [ 0.000, 1.000, 0.663 ]. PyMOL>color color105, resi 105 Executive: Colored 22 atoms. PyMOL>set_color color106, [0, 18, 255] Color: "color106" defined as [ 0.000, 0.071, 1.000 ]. PyMOL>color color106, resi 106 Executive: Colored 14 atoms. PyMOL>set_color color114, [0, 179, 255] Color: "color114" defined as [ 0.000, 0.702, 1.000 ]. PyMOL>color color114, resi 114 Executive: Colored 17 atoms. PyMOL>set_color color116, [0, 53, 255] Color: "color116" defined as [ 0.000, 0.208, 1.000 ]. PyMOL>color color116, resi 116 Executive: Colored 11 atoms. PyMOL>set_color color117, [0, 139, 255] Color: "color117" defined as [ 0.000, 0.545, 1.000 ]. PyMOL>color color117, resi 117 Executive: Colored 14 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 0.43 sec. = 8443.0 frames/hour (0.43 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit