PyMOL>load ./HR4435B_NMR_em_bcr3.pdb.iupac
HEADER    DNA BINDING PROTEIN                     02-AUG-10   2L1P
TITLE     NMR SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA-BINDING PROTEIN
TITLE    2 SATB1 FROM HOMO SAPIENS: NORTHEAST STRUCTURAL GENOMICS TARGET
TITLE    3 HR4435B(179-250)
COMPND    MOL_ID: 1;
COMPND   2 MOLECULE: DNA-BINDING PROTEIN SATB1;
COMPND   3 CHAIN: A;
COMPND   4 FRAGMENT: SEQUENCE DATABASE RESIDUES 179-250;
COMPND   5 SYNONYM: SPECIAL AT-RICH SEQUENCE-BINDING PROTEIN 1;
COMPND   6 ENGINEERED: YES
 ObjectMolecule: Read secondary structure assignments.
 ObjectMolReadPDBStr: read MODEL 1
 ObjectMolReadPDBStr: read MODEL 2
 ObjectMolReadPDBStr: read MODEL 3
 ObjectMolReadPDBStr: read MODEL 4
 ObjectMolReadPDBStr: read MODEL 5
 ObjectMolReadPDBStr: read MODEL 6
 ObjectMolReadPDBStr: read MODEL 7
 ObjectMolReadPDBStr: read MODEL 8
 ObjectMolReadPDBStr: read MODEL 9
 ObjectMolReadPDBStr: read MODEL 10
 ObjectMolReadPDBStr: read MODEL 11
 ObjectMolReadPDBStr: read MODEL 12
 ObjectMolReadPDBStr: read MODEL 13
 ObjectMolReadPDBStr: read MODEL 14
 ObjectMolReadPDBStr: read MODEL 15
 ObjectMolReadPDBStr: read MODEL 16
 ObjectMolReadPDBStr: read MODEL 17
 ObjectMolReadPDBStr: read MODEL 18
 ObjectMolReadPDBStr: read MODEL 19
 ObjectMolReadPDBStr: read MODEL 20
 CmdLoad: "./HR4435B_NMR_em_bcr3.pdb.iupac" loaded as "HR4435B_NMR_em_bcr3.pdb.iupac".
PyMOL>hide everything, all
PyMOL>dss
PyMOL>set stick_transparency,0.6
 Setting: stick_transparency set to 0.60000.
PyMOL>set cartoon_transparency,0.5
 Setting: cartoon_transparency set to 0.50000.
PyMOL>show cartoon, all
PyMOL>set bg_rgb, [1,1,1]
 Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ].
PyMOL>color blue, all
 Executive: Colored 1341 atoms and 1 object.
PyMOL>set label_color,black
 Setting: label_color set to black.
PyMOL>set label_font_id, 4
 Setting: label_font_id set to 4.
PyMOL>set label_size,3
 Setting: label_size set to 3.00000.
PyMOL>set_color color12, [0, 3, 255]
 Color: "color12" defined as [ 0.000, 0.012, 1.000 ].
PyMOL>color color12, resi 12
 Executive: Colored 19 atoms.
PyMOL>set_color color17, [0, 42, 255]
 Color: "color17" defined as [ 0.000, 0.165, 1.000 ].
PyMOL>color color17, resi 17
 Executive: Colored 24 atoms.
PyMOL>set_color color26, [0, 13, 255]
 Color: "color26" defined as [ 0.000, 0.051, 1.000 ].
PyMOL>color color26, resi 26
 Executive: Colored 19 atoms.
PyMOL>set_color color29, [0, 12, 255]
 Color: "color29" defined as [ 0.000, 0.047, 1.000 ].
PyMOL>color color29, resi 29
 Executive: Colored 19 atoms.
PyMOL>set_color color45, [0, 26, 255]
 Color: "color45" defined as [ 0.000, 0.102, 1.000 ].
PyMOL>color color45, resi 45
 Executive: Colored 11 atoms.
PyMOL>set_color color48, [0, 76, 255]
 Color: "color48" defined as [ 0.000, 0.298, 1.000 ].
PyMOL>color color48, resi 48
 Executive: Colored 17 atoms.
PyMOL>set_color color49, [0, 5, 255]
 Color: "color49" defined as [ 0.000, 0.020, 1.000 ].
PyMOL>color color49, resi 49
 Executive: Colored 19 atoms.
PyMOL>set_color color69, [0, 32, 255]
 Color: "color69" defined as [ 0.000, 0.125, 1.000 ].
PyMOL>color color69, resi 69
 Executive: Colored 20 atoms.
PyMOL>set_color color73, [0, 116, 255]
 Color: "color73" defined as [ 0.000, 0.455, 1.000 ].
PyMOL>color color73, resi 73
 Executive: Colored 21 atoms.
PyMOL>set_color color77, [0, 21, 255]
 Color: "color77" defined as [ 0.000, 0.082, 1.000 ].
PyMOL>color color77, resi 77
 Executive: Colored 22 atoms.
PyMOL>orient
PyMOL>ray 800,800
 Ray: render time: 0.63 sec. = 5705.8 frames/hour (0.63 sec. accum.).
PyMOL>png precision.png
 ScenePNG: wrote 800x800 pixel image to file "precision.png".
PyMOL>quit