PyMOL>load ./HR3646E_NMR_em_bcr3.pdb.iupac
HEADER    SIGNALING PROTEIN                       09-APR-09   2KHN
TITLE     NMR SOLUTION STRUCTURE OF THE EH 1 DOMAIN FROM HUMAN
TITLE    2 INTERSECTIN-1 PROTEIN. NORTHEAST STRUCTURAL GENOMICS
TITLE    3 CONSORTIUM TARGET HR3646E.
COMPND    MOL_ID: 1;
COMPND   2 MOLECULE: INTERSECTIN-1;
COMPND   3 CHAIN: A;
COMPND   4 FRAGMENT: UNP RESIDUES 1-111;
COMPND   5 SYNONYM: SH3 DOMAIN-CONTAINING PROTEIN 1A, SH3P17;
COMPND   6 ENGINEERED: YES
 ObjectMolecule: Read secondary structure assignments.
 ObjectMolReadPDBStr: read MODEL 1
 ObjectMolReadPDBStr: read MODEL 2
 ObjectMolReadPDBStr: read MODEL 3
 ObjectMolReadPDBStr: read MODEL 4
 ObjectMolReadPDBStr: read MODEL 5
 ObjectMolReadPDBStr: read MODEL 6
 ObjectMolReadPDBStr: read MODEL 7
 ObjectMolReadPDBStr: read MODEL 8
 ObjectMolReadPDBStr: read MODEL 9
 ObjectMolReadPDBStr: read MODEL 10
 ObjectMolReadPDBStr: read MODEL 11
 ObjectMolReadPDBStr: read MODEL 12
 ObjectMolReadPDBStr: read MODEL 13
 ObjectMolReadPDBStr: read MODEL 14
 ObjectMolReadPDBStr: read MODEL 15
 ObjectMolReadPDBStr: read MODEL 16
 ObjectMolReadPDBStr: read MODEL 17
 ObjectMolReadPDBStr: read MODEL 18
 ObjectMolReadPDBStr: read MODEL 19
 ObjectMolReadPDBStr: read MODEL 20
 CmdLoad: "./HR3646E_NMR_em_bcr3.pdb.iupac" loaded as "HR3646E_NMR_em_bcr3.pdb.iupac".
PyMOL>hide everything, all
PyMOL>dss
PyMOL>set stick_transparency,0.6
 Setting: stick_transparency set to 0.60000.
PyMOL>set cartoon_transparency,0.5
 Setting: cartoon_transparency set to 0.50000.
PyMOL>show cartoon, all
PyMOL>set bg_rgb, [1,1,1]
 Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ].
PyMOL>color blue, all
 Executive: Colored 1903 atoms and 1 object.
PyMOL>set label_color,black
 Setting: label_color set to black.
PyMOL>set label_font_id, 4
 Setting: label_font_id set to 4.
PyMOL>set label_size,3
 Setting: label_size set to 3.00000.
PyMOL>set_color color14, [255, 253, 0]
 Color: "color14" defined as [ 1.000, 0.992, 0.000 ].
PyMOL>color color14, resi 14
 Executive: Colored 20 atoms.
PyMOL>show sticks, res 14
PyMOL>set_color color15, [255, 253, 0]
 Color: "color15" defined as [ 1.000, 0.992, 0.000 ].
PyMOL>color color15, resi 15
 Executive: Colored 14 atoms.
PyMOL>show sticks, res 15
PyMOL>set_color color25, [0, 192, 255]
 Color: "color25" defined as [ 0.000, 0.753, 1.000 ].
PyMOL>color color25, resi 25
 Executive: Colored 24 atoms.
PyMOL>set_color color27, [0, 255, 106]
 Color: "color27" defined as [ 0.000, 1.000, 0.416 ].
PyMOL>color color27, resi 27
 Executive: Colored 19 atoms.
PyMOL>set_color color31, [0, 219, 255]
 Color: "color31" defined as [ 0.000, 0.859, 1.000 ].
PyMOL>color color31, resi 31
 Executive: Colored 15 atoms.
PyMOL>set_color color35, [0, 189, 255]
 Color: "color35" defined as [ 0.000, 0.741, 1.000 ].
PyMOL>color color35, resi 35
 Executive: Colored 18 atoms.
PyMOL>set_color color38, [0, 23, 255]
 Color: "color38" defined as [ 0.000, 0.090, 1.000 ].
PyMOL>color color38, resi 38
 Executive: Colored 17 atoms.
PyMOL>set_color color39, [10, 255, 0]
 Color: "color39" defined as [ 0.039, 1.000, 0.000 ].
PyMOL>color color39, resi 39
 Executive: Colored 20 atoms.
PyMOL>set_color color42, [0, 255, 216]
 Color: "color42" defined as [ 0.000, 1.000, 0.847 ].
PyMOL>color color42, resi 42
 Executive: Colored 19 atoms.
PyMOL>set_color color44, [0, 68, 255]
 Color: "color44" defined as [ 0.000, 0.267, 1.000 ].
PyMOL>color color44, resi 44
 Executive: Colored 14 atoms.
PyMOL>set_color color48, [0, 1, 255]
 Color: "color48" defined as [ 0.000, 0.004, 1.000 ].
PyMOL>color color48, resi 48
 Executive: Colored 20 atoms.
PyMOL>set_color color49, [0, 255, 45]
 Color: "color49" defined as [ 0.000, 1.000, 0.176 ].
PyMOL>color color49, resi 49
 Executive: Colored 19 atoms.
PyMOL>set_color color58, [0, 73, 255]
 Color: "color58" defined as [ 0.000, 0.286, 1.000 ].
PyMOL>color color58, resi 58
 Executive: Colored 20 atoms.
PyMOL>set_color color68, [0, 54, 255]
 Color: "color68" defined as [ 0.000, 0.212, 1.000 ].
PyMOL>color color68, resi 68
 Executive: Colored 19 atoms.
PyMOL>set_color color71, [165, 255, 0]
 Color: "color71" defined as [ 0.647, 1.000, 0.000 ].
PyMOL>color color71, resi 71
 Executive: Colored 19 atoms.
PyMOL>set_color color72, [0, 202, 255]
 Color: "color72" defined as [ 0.000, 0.792, 1.000 ].
PyMOL>color color72, resi 72
 Executive: Colored 24 atoms.
PyMOL>set_color color74, [0, 255, 105]
 Color: "color74" defined as [ 0.000, 1.000, 0.412 ].
PyMOL>color color74, resi 74
 Executive: Colored 19 atoms.
PyMOL>set_color color75, [0, 192, 255]
 Color: "color75" defined as [ 0.000, 0.753, 1.000 ].
PyMOL>color color75, resi 75
 Executive: Colored 10 atoms.
PyMOL>set_color color76, [0, 255, 158]
 Color: "color76" defined as [ 0.000, 1.000, 0.620 ].
PyMOL>color color76, resi 76
 Executive: Colored 12 atoms.
PyMOL>set_color color83, [0, 200, 255]
 Color: "color83" defined as [ 0.000, 0.784, 1.000 ].
PyMOL>color color83, resi 83
 Executive: Colored 17 atoms.
PyMOL>set_color color87, [0, 108, 255]
 Color: "color87" defined as [ 0.000, 0.424, 1.000 ].
PyMOL>color color87, resi 87
 Executive: Colored 15 atoms.
PyMOL>set_color color88, [0, 242, 255]
 Color: "color88" defined as [ 0.000, 0.949, 1.000 ].
PyMOL>color color88, resi 88
 Executive: Colored 20 atoms.
PyMOL>set_color color90, [0, 255, 224]
 Color: "color90" defined as [ 0.000, 1.000, 0.878 ].
PyMOL>color color90, resi 90
 Executive: Colored 19 atoms.
PyMOL>set_color color91, [255, 204, 0]
 Color: "color91" defined as [ 1.000, 0.800, 0.000 ].
PyMOL>color color91, resi 91
 Executive: Colored 10 atoms.
PyMOL>show sticks, res 91
PyMOL>set_color color92, [0, 105, 255]
 Color: "color92" defined as [ 0.000, 0.412, 1.000 ].
PyMOL>color color92, resi 92
 Executive: Colored 17 atoms.
PyMOL>set_color color94, [0, 255, 209]
 Color: "color94" defined as [ 0.000, 1.000, 0.820 ].
PyMOL>color color94, resi 94
 Executive: Colored 19 atoms.
PyMOL>set_color color95, [0, 114, 255]
 Color: "color95" defined as [ 0.000, 0.447, 1.000 ].
PyMOL>color color95, resi 95
 Executive: Colored 19 atoms.
PyMOL>set_color color97, [0, 110, 255]
 Color: "color97" defined as [ 0.000, 0.431, 1.000 ].
PyMOL>color color97, resi 97
 Executive: Colored 19 atoms.
PyMOL>set_color color98, [0, 255, 71]
 Color: "color98" defined as [ 0.000, 1.000, 0.278 ].
PyMOL>color color98, resi 98
 Executive: Colored 22 atoms.
PyMOL>set_color color106, [0, 255, 195]
 Color: "color106" defined as [ 0.000, 1.000, 0.765 ].
PyMOL>color color106, resi 106
 Executive: Colored 11 atoms.
PyMOL>set_color color112, [0, 255, 138]
 Color: "color112" defined as [ 0.000, 1.000, 0.541 ].
PyMOL>color color112, resi 112
 Executive: Colored 17 atoms.
PyMOL>label 14/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 15/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 91/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>orient
PyMOL>ray 800,800
 Ray: render time: 0.46 sec. = 7832.2 frames/hour (0.46 sec. accum.).
PyMOL>png precision.png
 ScenePNG: wrote 800x800 pixel image to file "precision.png".
PyMOL>quit