read coor pdb HR3102A_R3Cons_em_bcr3.pdb
all
rmsd coor heavy 11A-30A,33A-42A,45A-83A
ave
resOrd_rmsd_heavy
rmsd coor backbone 11A-30A,33A-42A,45A-83A
ave
resOrd_rmsd_bb
write
best.pdb
coor
all
all
pdb
quit