read coor pdb HR1958_NMR_em_bcr3.pdb all rmsd coor heavy 4A-16A,19A-30A,33A-67A,70A-139A ave resSel_rmsd_heavy rmsd coor backbone 4A-16A,19A-30A,33A-67A,70A-139A ave resSel_rmsd_bb write selSi.pdb coor all all pdb quit