PyMOL>load ./GMR137_R3_em_bcr3.pdb.iupac ObjectMolReadPDBStr: read MODEL 1 ObjectMolReadPDBStr: read MODEL 2 ObjectMolReadPDBStr: read MODEL 3 ObjectMolReadPDBStr: read MODEL 4 ObjectMolReadPDBStr: read MODEL 5 ObjectMolReadPDBStr: read MODEL 6 ObjectMolReadPDBStr: read MODEL 7 ObjectMolReadPDBStr: read MODEL 8 ObjectMolReadPDBStr: read MODEL 9 ObjectMolReadPDBStr: read MODEL 10 ObjectMolReadPDBStr: read MODEL 11 ObjectMolReadPDBStr: read MODEL 12 ObjectMolReadPDBStr: read MODEL 13 ObjectMolReadPDBStr: read MODEL 14 ObjectMolReadPDBStr: read MODEL 15 ObjectMolReadPDBStr: read MODEL 16 ObjectMolReadPDBStr: read MODEL 17 ObjectMolReadPDBStr: read MODEL 18 ObjectMolReadPDBStr: read MODEL 19 ObjectMolReadPDBStr: read MODEL 20 CmdLoad: "./GMR137_R3_em_bcr3.pdb.iupac" loaded as "GMR137_R3_em_bcr3.pdb.iupac". PyMOL>hide everything, all PyMOL>dss PyMOL>set stick_transparency,0.6 Setting: stick_transparency set to 0.60000. PyMOL>set cartoon_transparency,0.5 Setting: cartoon_transparency set to 0.50000. PyMOL>show cartoon, all PyMOL>set bg_rgb, [1,1,1] Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ]. PyMOL>color blue, all Executive: Colored 1180 atoms and 1 object. PyMOL>set label_color,black Setting: label_color set to black. PyMOL>set label_font_id, 4 Setting: label_font_id set to 4. PyMOL>set label_size,3 Setting: label_size set to 3.00000. PyMOL>set_color color2, [0, 7, 255] Color: "color2" defined as [ 0.000, 0.027, 1.000 ]. PyMOL>color color2, resi 2 Executive: Colored 14 atoms. PyMOL>set_color color3, [0, 6, 255] Color: "color3" defined as [ 0.000, 0.024, 1.000 ]. PyMOL>color color3, resi 3 Executive: Colored 19 atoms. PyMOL>set_color color5, [0, 255, 174] Color: "color5" defined as [ 0.000, 1.000, 0.682 ]. PyMOL>color color5, resi 5 Executive: Colored 16 atoms. PyMOL>set_color color6, [0, 67, 255] Color: "color6" defined as [ 0.000, 0.263, 1.000 ]. PyMOL>color color6, resi 6 Executive: Colored 14 atoms. PyMOL>set_color color18, [0, 81, 255] Color: "color18" defined as [ 0.000, 0.318, 1.000 ]. PyMOL>color color18, resi 18 Executive: Colored 19 atoms. PyMOL>set_color color19, [0, 25, 255] Color: "color19" defined as [ 0.000, 0.098, 1.000 ]. PyMOL>color color19, resi 19 Executive: Colored 14 atoms. PyMOL>set_color color20, [255, 180, 0] Color: "color20" defined as [ 1.000, 0.706, 0.000 ]. PyMOL>color color20, resi 20 Executive: Colored 16 atoms. PyMOL>show sticks, res 20 PyMOL>set_color color23, [0, 255, 209] Color: "color23" defined as [ 0.000, 1.000, 0.820 ]. PyMOL>color color23, resi 23 Executive: Colored 19 atoms. PyMOL>set_color color26, [0, 189, 255] Color: "color26" defined as [ 0.000, 0.741, 1.000 ]. PyMOL>color color26, resi 26 Executive: Colored 10 atoms. PyMOL>set_color color35, [0, 44, 255] Color: "color35" defined as [ 0.000, 0.173, 1.000 ]. PyMOL>color color35, resi 35 Executive: Colored 16 atoms. PyMOL>set_color color37, [236, 255, 0] Color: "color37" defined as [ 0.925, 1.000, 0.000 ]. PyMOL>color color37, resi 37 Executive: Colored 16 atoms. PyMOL>set_color color39, [15, 255, 0] Color: "color39" defined as [ 0.059, 1.000, 0.000 ]. PyMOL>color color39, resi 39 Executive: Colored 19 atoms. PyMOL>set_color color44, [255, 102, 0] Color: "color44" defined as [ 1.000, 0.400, 0.000 ]. PyMOL>color color44, resi 44 Executive: Colored 19 atoms. PyMOL>show sticks, res 44 PyMOL>set_color color53, [0, 57, 255] Color: "color53" defined as [ 0.000, 0.224, 1.000 ]. PyMOL>color color53, resi 53 Executive: Colored 14 atoms. PyMOL>set_color color58, [0, 2, 255] Color: "color58" defined as [ 0.000, 0.008, 1.000 ]. PyMOL>color color58, resi 58 Executive: Colored 12 atoms. PyMOL>set_color color60, [136, 255, 0] Color: "color60" defined as [ 0.533, 1.000, 0.000 ]. PyMOL>color color60, resi 60 Executive: Colored 16 atoms. PyMOL>set_color color62, [0, 255, 61] Color: "color62" defined as [ 0.000, 1.000, 0.239 ]. PyMOL>color color62, resi 62 Executive: Colored 20 atoms. PyMOL>label 20/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>label 44/ca,"%s" %(resi) Label: labelled 1 atoms. PyMOL>orient PyMOL>ray 800,800 Ray: render time: 0.40 sec. = 8937.0 frames/hour (0.40 sec. accum.). PyMOL>png precision.png ScenePNG: wrote 800x800 pixel image to file "precision.png". PyMOL>quit