PROCHECK-NMR. PROCHECK v.3.5.4 (Feb 2001) ----------------------------------------- Coordinates file: [ ER382A_XRay_em_bcr3_noHs.pdb ] * No ranges file supplied - all models and residues will be included Program directory: /farm/software/procheck/ Running clean-up on file: ER382A_XRay_em_bcr3_noHs.pdb ** Unrecognized atom type [ SE ] in residue MET M 7 ** Unrecognized atom type [ SE ] in residue MET M 14 ** Unrecognized atom type [ SE ] in residue MET M 40 ** Unrecognized atom type [ SE ] in residue MET M 73 ** Unrecognized atom type [ SE ] in residue MET M 80 ** Unrecognized atom type [ SE ] in residue MET M 106 ** Unrecognized atom type [ SE ] in residue MET M 139 ** Unrecognized atom type [ SE ] in residue MET M 146 ** Unrecognized atom type [ SE ] in residue MET M 172 ** Unrecognized atom type [ SE ] in residue MET M 206 ** Unrecognized atom type [ SE ] in residue MET M 213 ** Unrecognized atom type [ SE ] in residue MET M 239 ** Unrecognized atom type [ SE ] in residue MET M 273 ** Unrecognized atom type [ SE ] in residue MET M 280 ** Unrecognized atom type [ SE ] in residue MET M 306 ** Unrecognized atom type [ SE ] in residue MET M 339 ** Unrecognized atom type [ SE ] in residue MET M 346 ** Unrecognized atom type [ SE ] in residue MET M 372 ** Unrecognized atom type [ SE ] in residue MET M 405 ** Unrecognized atom type [ SE ] in residue MET M 412 ** Unrecognized atom type [ SE ] in residue MET M 438 ** Unrecognized atom type [ SE ] in residue MET M 472 ** Unrecognized atom type [ SE ] in residue MET M 479 ** Unrecognized atom type [ SE ] in residue MET M 505 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * ASP M 4 ASP M 11 ARG M 13 ASP M 24 ASP M 25 TYR M 32 ARG M 44 * GLU M 52 ASP M 77 ARG M 79 ASP M 84 GLU M 88 ASP M 90 ASP M 91 * ASP M 92 TYR M 98 ASP M 100 ARG M 110 ASP M 111 GLU M 118 ARG M 145 * ASP M 156 ASP M 157 TYR M 164 ARG M 176 ASP M 177 ASP M 178 ASP M 203 * ASP M 210 ARG M 212 ASP M 217 GLU M 221 ASP M 223 ASP M 224 TYR M 231 * ARG M 243 ASP M 244 GLU M 251 TYR M 271 ASP M 277 ARG M 279 ASP M 284 * GLU M 288 ASP M 290 ASP M 291 TYR M 298 ASP M 311 GLU M 318 ASP M 343 * ARG M 345 ASP M 350 TYR M 364 ASP M 378 GLU M 384 ASP M 402 ARG M 411 * ASP M 416 GLU M 420 TYR M 430 ARG M 442 ASP M 469 ARG M 478 ASP M 483 * ASP M 490 ASP M 491 ARG M 509 ASP M 510 * NMR ensemble comprises 1 model structures * Program completed ................................................................. Secondary structure assignment * NMR ensemble comprises 1 model structures * Program completed .................................................................. RMS deviations for ensemble * Warning. No MODEL records found in PDB file * Single structure assumed; no RMS deviations to be calculated * Program completed .................................................................. Phi-psi and chi1-chi2 distributions Main Ramachandran plot * File: All-residue Ramachandran plots * File: All-residue chi1-chi2 plots * File: * Program complete .................................................................. Dihedral angle distributions and quality plots **** No torsion angle restraints found Phi angle distributions * File: Psi angle distributions * File: Chi-1 angle distributions * File: Chi-2 angle distributions * File: Ensemble Ramachandran plots * File: Ensemble chi1-chi2 plots * File: Residue properties plot * File: Model secondary structures * File: .................................................................. Restraints and restraint violation plots * * Restraints read in from file: * ER382A_XRay_em_bcr3_noHs.nrv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Restraints read in from file: * ER382A_XRay_em_bcr3_noHs.hrv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Restraints read in from file: * ER382A_XRay_em_bcr3_noHs.srv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Total number of restraints read in: 0 * **** No distance restraints found **** No torsion angle restraints found * **** No restraints found, so no restraint plots will be produced ..................................................................