Running PDBSTAT from Linux 
  Ayuda is on: /farm/software/PdbStat/PdbStat-5.7

  (C)
  (C)  Pdbstat -- A program to evaluate some statistics of macromolecules,
  (C)             given the cartesian coordinates.
  (C)
  (C)  (c) Copyright 1992-2012 Roberto Tejero and Gaetano T. Montelione
  (C)      Center for Advanced Technology and Medicine (CABM)
  (C)      Rutgers University
  (C)
       ** VERSION:  5.7-exp dom mar 10 23:17:04 UTC 2013  ** 
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
       ===============>  W E L C O M E  to PDBStat <================   
 PDBStat has become a tool able (between other things) of:
    a) read and interconvert between DISMAN, DYANA, PDB, DISCOVER, IMPACT 
    b) elaborate some info about the molecule as MW, Radius of gyration, .. 
    c) investigate the setereochemical quality of a protein by evaluating 
       phi, psi, chi1, impropers and chirality 
 The sequence of acts should be: 
       1.- read a file (coords, constr) 
       2.- read a sequence file (can be free format) 
       3.- Follow menu (calculating, writing ...) 

   NOTE: Be aware that if you read in a constraint file you 
         *ALWAYS* need to read a sequence file also

 HAVE FUN AND ENJOY !!
 **** For more info type `help' or `menu' **** 

  --> ... Reading/Loading Distances file  ...  125 distance records read
  --> ... Reading/Loading Dihedral Library .. 1119 library records read

PdbStat> [rea]d [hel]p [his]tory [men]u [phi] [qui]t...

PdbStat>  leyendo PDB 
  > locate_file(): file `temp_bcm_111.pdb' opened for reading 
  > ReadCoordsPdb(): >> HEADER    STRUCTURAL GENOMICS, UNKNOWN FUNCTION   28-FEB-09   3GGN              
  > ReadCoordsPdb(): >> TITLE     CRYSTAL STRUCTURE OF DR_A0006 FROM DEINOCOCCUS RADIODURANS.           
  > ReadCoordsPdb(): >> TITLE    2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET DRR147D              
  > ReadCoordsPdb(): >> COMPND    MOL_ID: 1;                                                            
  > ReadCoordsPdb(): >> COMPND   2 MOLECULE: UNCHARACTERIZED PROTEIN DR_A0006;                          
   1  > ReadCoordsPdb(): After scanning there is(are) 1 model(s) 

  > ReadCoordsPdb(): *** SUMMARY ***
  > ReadCoordsPdb(): -->  2001 ATOM records read from file 
  > ReadCoordsPdb(): -->  2001 Regular IUPAC Atoms 
  > ReadCoordsPdb(): -->     0 Pseudo-atoms (DISMAN type) 
  > ReadCoordsPdb(): -->     0 Lone pairs
  > ReadCoordsPdb(): Bye ... 
  > =============================== INFO ================================ 
  > INFO_mol: # atoms:     2001 (1260 C, 0 H, 372 O, 365 N, 4 S, 0 Q, 0 Metals)
  > INFO_mol: # residues:     260 (Avg. mol. weight: 101.3)
  > INFO_mol: # -- M.W. : 26325.5 g/mol. (26.33 kD)     Estimated RoG <S2>:  18.20 
  > INFO_mol: CenterMass() -- Working PDB model 1 in file, model no. 1 
  > INFO_mol: CenterMass() -- Molecule `temp_bcm_111.pdb' model #1, TOTAL RESIDUES: 260
  > INFO_mol: Radius of Gyration <S2> :    20.5307  angstroms 
  > INFO_mol: Center of Masses: x_cm(-0.259), y_cm(18.662), z_cm(16.514) 

  > INFO_res:  TVVRDAVTIG KPAEQLYAVW RDLPGLPLLM THLRSVEVLD DKRSRWTVEA 
  > INFO_res:  PAPLGTVSWE AELTADEPGK RIAWRSLPGA RIENSGEVLF RPAPGARGTE 
  > INFO_res:  VVVRLTYREP SQQLRDDLMR FKREQELGLE TVVRDAVTIG KPAEQLYAVW 
  > INFO_res:  RDLPGLPLLM THLRSVEVLD DKRSRWTVEA PAPLGTVSWE AELTADEPGK 
  > INFO_res:  RIAWRSLPGA RIENSGEVLF RPAPGARGTE VVVRLTYRPP PSQQLRDDLM 
  > INFO_res:  RFKREQELGL 
  > INFO_res:  
  > INFO_res:  THR  VAL  VAL  ARG  ASP  ALA  VAL  THR  ILE  GLY  LYS  PRO  
  > INFO_res:  ALA  GLU  GLN  LEU  TYR  ALA  VAL  TRP  ARG  ASP  LEU  PRO  
  > INFO_res:  GLY  LEU  PRO  LEU  LEU  MET  THR  HIS  LEU  ARG  SER  VAL  
  > INFO_res:  GLU  VAL  LEU  ASP  ASP  LYS  ARG  SER  ARG  TRP  THR  VAL  
  > INFO_res:  GLU  ALA  PRO  ALA  PRO  LEU  GLY  THR  VAL  SER  TRP  GLU  
  > INFO_res:  ALA  GLU  LEU  THR  ALA  ASP  GLU  PRO  GLY  LYS  ARG  ILE  
  > INFO_res:  ALA  TRP  ARG  SER  LEU  PRO  GLY  ALA  ARG  ILE  GLU  ASN  
  > INFO_res:  SER  GLY  GLU  VAL  LEU  PHE  ARG  PRO  ALA  PRO  GLY  ALA  
  > INFO_res:  ARG  GLY  THR  GLU  VAL  VAL  VAL  ARG  LEU  THR  TYR  ARG  
  > INFO_res:  GLU  PRO  SER  GLN  GLN  LEU  ARG  ASP  ASP  LEU  MET  ARG  
  > INFO_res:  PHE  LYS  ARG  GLU  GLN  GLU  LEU  GLY  LEU  GLU  THR  VAL  
  > INFO_res:  VAL  ARG  ASP  ALA  VAL  THR  ILE  GLY  LYS  PRO  ALA  GLU  
  > INFO_res:  GLN  LEU  TYR  ALA  VAL  TRP  ARG  ASP  LEU  PRO  GLY  LEU  
  > INFO_res:  PRO  LEU  LEU  MET  THR  HIS  LEU  ARG  SER  VAL  GLU  VAL  
  > INFO_res:  LEU  ASP  ASP  LYS  ARG  SER  ARG  TRP  THR  VAL  GLU  ALA  
  > INFO_res:  PRO  ALA  PRO  LEU  GLY  THR  VAL  SER  TRP  GLU  ALA  GLU  
  > INFO_res:  LEU  THR  ALA  ASP  GLU  PRO  GLY  LYS  ARG  ILE  ALA  TRP  
  > INFO_res:  ARG  SER  LEU  PRO  GLY  ALA  ARG  ILE  GLU  ASN  SER  GLY  
  > INFO_res:  GLU  VAL  LEU  PHE  ARG  PRO  ALA  PRO  GLY  ALA  ARG  GLY  
  > INFO_res:  THR  GLU  VAL  VAL  VAL  ARG  LEU  THR  TYR  ARG  PRO  PRO  
  > INFO_res:  PRO  SER  GLN  GLN  LEU  ARG  ASP  ASP  LEU  MET  ARG  PHE  
  > INFO_res:  LYS  ARG  GLU  GLN  GLU  LEU  GLY  LEU  
  > INFO_res:  
  > INFO_res:  22 ALA    30 ARG     2 ASN    14 ASP     8 GLN    24 GLU  
  > INFO_res:  18 GLY     2 HIS     6 ILE    32 LEU     8 LYS     4 MET  
  > INFO_res:   4 PHE    22 PRO    12 SER    16 THR     4 TYR     8 TRP  
  > INFO_res:  24 VAL  
  > INFO_res: DISULFIDE: ** NO INFO FOR DISULFIDES IN FILE 
  > ===================================================================== 
  > ReadCoordsPdb():  *** x-mer, 2 [2] chains 


PdbStat> PdbStat>  ** Model with _NO_ hydrogens, nothing to fix

PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER: ... backbone, heavy, full set? (back/heavy/all/select):   > COORD_writer: Format  (pdb/congen/RasMol) ? :   > COORD_writer: * ---- Wrong typing BUDDY !! ----- *
  > COORD_writer: * Option NOT recognized, type again please *
  > COORD_writer: Format  (pdb/congen/RasMol) ? : 
PdbStat> PdbStat>  ** Model with _NO_ hydrogens, nothing to fix

PdbStat> 
  > WRITER: Output file name ?:_    > WRITER: Coords, constraints, aco or sequence file? :_    > WRITER: ... backbone, heavy, full set? (back/heavy/all/select):   > COORD_writer: Format  (pdb/congen/RasMol) ? :   > COORD_writer: * ---- Wrong typing BUDDY !! ----- *
  > COORD_writer: * Option NOT recognized, type again please *
  > COORD_writer: Format  (pdb/congen/RasMol) ? : 
PdbStat> 
PdbStat>  *END* of program detected, BYE! ...