read coor pdb DHR8C_R3_em_bcr3.pdb
all
rmsd coor heavy 5M-27M,30M-40M,50M-62M,86M-108M,111M-121M,131M-143M
ave
resOrd_rmsd_heavy
rmsd coor backbone 5M-27M,30M-40M,50M-62M,86M-108M,111M-121M,131M-143M
ave
resOrd_rmsd_bb
write
best.pdb
coor
all
all
pdb
quit