read coor pdb DHR29B_R3Cons_em_bcr3.pdb
all
rmsd coor heavy 9A-17A,24A-42A,45A-55A,59A-72A,75A-91A
ave
resSel_rmsd_heavy
rmsd coor backbone 9A-17A,24A-42A,45A-55A,59A-72A,75A-91A
ave
resSel_rmsd_bb
write
selSi.pdb
coor
all
all
pdb
quit