PyMOL>load ./DHR29B_NMR_em_bcr3.pdb.iupac
HEADER    STRUCTURAL GENOMICS, UNKNOWN FUNCTION   20-OCT-09   2KPU
TITLE     NMR STRUCTURE OF YBBR FAMILY PROTEIN DHAF_0833 (RESIDUES 32-118) FROM
TITLE    2 DESULFITOBACTERIUM HAFNIENSE DCB-2: NORTHEAST STRUCTURAL GENOMICS
TITLE    3 CONSORTIUM TARGET DHR29B
COMPND    MOL_ID: 1;
COMPND   2 MOLECULE: YBBR FAMILY PROTEIN;
COMPND   3 CHAIN: A;
COMPND   4 FRAGMENT: SEQUENCE DATABASE RESIDUES 32-118;
COMPND   5 ENGINEERED: YES
 ObjectMolecule: Read secondary structure assignments.
 ObjectMolReadPDBStr: read MODEL 1
 ObjectMolReadPDBStr: read MODEL 2
 ObjectMolReadPDBStr: read MODEL 3
 ObjectMolReadPDBStr: read MODEL 4
 ObjectMolReadPDBStr: read MODEL 5
 ObjectMolReadPDBStr: read MODEL 6
 ObjectMolReadPDBStr: read MODEL 7
 ObjectMolReadPDBStr: read MODEL 8
 ObjectMolReadPDBStr: read MODEL 9
 ObjectMolReadPDBStr: read MODEL 10
 ObjectMolReadPDBStr: read MODEL 11
 ObjectMolReadPDBStr: read MODEL 12
 ObjectMolReadPDBStr: read MODEL 13
 ObjectMolReadPDBStr: read MODEL 14
 ObjectMolReadPDBStr: read MODEL 15
 ObjectMolReadPDBStr: read MODEL 16
 ObjectMolReadPDBStr: read MODEL 17
 ObjectMolReadPDBStr: read MODEL 18
 ObjectMolReadPDBStr: read MODEL 19
 ObjectMolReadPDBStr: read MODEL 20
 CmdLoad: "./DHR29B_NMR_em_bcr3.pdb.iupac" loaded as "DHR29B_NMR_em_bcr3.pdb.iupac".
PyMOL>hide everything, all
PyMOL>dss
PyMOL>set stick_transparency,0.6
 Setting: stick_transparency set to 0.60000.
PyMOL>set cartoon_transparency,0.5
 Setting: cartoon_transparency set to 0.50000.
PyMOL>show cartoon, all
PyMOL>set bg_rgb, [1,1,1]
 Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ].
PyMOL>color blue, all
 Executive: Colored 1522 atoms and 1 object.
PyMOL>set label_color,black
 Setting: label_color set to black.
PyMOL>set label_font_id, 4
 Setting: label_font_id set to 4.
PyMOL>set label_size,3
 Setting: label_size set to 3.00000.
PyMOL>set_color color9, [0, 16, 255]
 Color: "color9" defined as [ 0.000, 0.063, 1.000 ].
PyMOL>color color9, resi 9
 Executive: Colored 14 atoms.
PyMOL>set_color color10, [0, 81, 255]
 Color: "color10" defined as [ 0.000, 0.318, 1.000 ].
PyMOL>color color10, resi 10
 Executive: Colored 14 atoms.
PyMOL>set_color color15, [0, 255, 52]
 Color: "color15" defined as [ 0.000, 1.000, 0.204 ].
PyMOL>color color15, resi 15
 Executive: Colored 19 atoms.
PyMOL>set_color color18, [0, 93, 255]
 Color: "color18" defined as [ 0.000, 0.365, 1.000 ].
PyMOL>color color18, resi 18
 Executive: Colored 22 atoms.
PyMOL>set_color color21, [0, 47, 255]
 Color: "color21" defined as [ 0.000, 0.184, 1.000 ].
PyMOL>color color21, resi 21
 Executive: Colored 14 atoms.
PyMOL>set_color color24, [0, 152, 255]
 Color: "color24" defined as [ 0.000, 0.596, 1.000 ].
PyMOL>color color24, resi 24
 Executive: Colored 11 atoms.
PyMOL>set_color color30, [0, 255, 203]
 Color: "color30" defined as [ 0.000, 1.000, 0.796 ].
PyMOL>color color30, resi 30
 Executive: Colored 19 atoms.
PyMOL>set_color color35, [0, 58, 255]
 Color: "color35" defined as [ 0.000, 0.227, 1.000 ].
PyMOL>color color35, resi 35
 Executive: Colored 16 atoms.
PyMOL>set_color color36, [0, 128, 255]
 Color: "color36" defined as [ 0.000, 0.502, 1.000 ].
PyMOL>color color36, resi 36
 Executive: Colored 22 atoms.
PyMOL>set_color color37, [0, 255, 209]
 Color: "color37" defined as [ 0.000, 1.000, 0.820 ].
PyMOL>color color37, resi 37
 Executive: Colored 14 atoms.
PyMOL>set_color color41, [0, 255, 139]
 Color: "color41" defined as [ 0.000, 1.000, 0.545 ].
PyMOL>color color41, resi 41
 Executive: Colored 14 atoms.
PyMOL>set_color color42, [0, 25, 255]
 Color: "color42" defined as [ 0.000, 0.098, 1.000 ].
PyMOL>color color42, resi 42
 Executive: Colored 14 atoms.
PyMOL>set_color color44, [0, 208, 255]
 Color: "color44" defined as [ 0.000, 0.816, 1.000 ].
PyMOL>color color44, resi 44
 Executive: Colored 19 atoms.
PyMOL>set_color color49, [0, 15, 255]
 Color: "color49" defined as [ 0.000, 0.059, 1.000 ].
PyMOL>color color49, resi 49
 Executive: Colored 19 atoms.
PyMOL>set_color color52, [0, 165, 255]
 Color: "color52" defined as [ 0.000, 0.647, 1.000 ].
PyMOL>color color52, resi 52
 Executive: Colored 21 atoms.
PyMOL>set_color color55, [0, 123, 255]
 Color: "color55" defined as [ 0.000, 0.482, 1.000 ].
PyMOL>color color55, resi 55
 Executive: Colored 19 atoms.
PyMOL>set_color color72, [0, 105, 255]
 Color: "color72" defined as [ 0.000, 0.412, 1.000 ].
PyMOL>color color72, resi 72
 Executive: Colored 19 atoms.
PyMOL>set_color color74, [0, 41, 255]
 Color: "color74" defined as [ 0.000, 0.161, 1.000 ].
PyMOL>color color74, resi 74
 Executive: Colored 14 atoms.
PyMOL>set_color color75, [0, 255, 204]
 Color: "color75" defined as [ 0.000, 1.000, 0.800 ].
PyMOL>color color75, resi 75
 Executive: Colored 19 atoms.
PyMOL>set_color color86, [0, 37, 255]
 Color: "color86" defined as [ 0.000, 0.145, 1.000 ].
PyMOL>color color86, resi 86
 Executive: Colored 14 atoms.
PyMOL>set_color color89, [0, 83, 255]
 Color: "color89" defined as [ 0.000, 0.325, 1.000 ].
PyMOL>color color89, resi 89
 Executive: Colored 19 atoms.
PyMOL>orient
PyMOL>ray 800,800
 Ray: render time: 0.45 sec. = 7984.5 frames/hour (0.45 sec. accum.).
PyMOL>png precision.png
 ScenePNG: wrote 800x800 pixel image to file "precision.png".
PyMOL>quit