Running PDBSTAT from Linux 
  Ayuda is on: /farm/software/PdbStat/PdbStat-5.7

  (C)
  (C)  Pdbstat -- A program to evaluate some statistics of macromolecules,
  (C)             given the cartesian coordinates.
  (C)
  (C)  (c) Copyright 1992-2012 Roberto Tejero and Gaetano T. Montelione
  (C)      Center for Advanced Technology and Medicine (CABM)
  (C)      Rutgers University
  (C)
       ** VERSION:  5.7-exp dom mar 10 23:17:04 UTC 2013  ** 
       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
       ===============>  W E L C O M E  to PDBStat <================   
 PDBStat has become a tool able (between other things) of:
    a) read and interconvert between DISMAN, DYANA, PDB, DISCOVER, IMPACT 
    b) elaborate some info about the molecule as MW, Radius of gyration, .. 
    c) investigate the setereochemical quality of a protein by evaluating 
       phi, psi, chi1, impropers and chirality 
 The sequence of acts should be: 
       1.- read a file (coords, constr) 
       2.- read a sequence file (can be free format) 
       3.- Follow menu (calculating, writing ...) 

   NOTE: Be aware that if you read in a constraint file you 
         *ALWAYS* need to read a sequence file also

 HAVE FUN AND ENJOY !!
 **** For more info type `help' or `menu' **** 

  --> ... Reading/Loading Distances file  ...  125 distance records read
  --> ... Reading/Loading Dihedral Library .. 1119 library records read

PdbStat> [rea]d [hel]p [his]tory [men]u [phi] [qui]t...

PdbStat>  leyendo PDB 
  > locate_file(): file `CTR148A_NMR_em_bcr3.pdb' opened for reading 
  > ReadCoordsPdb(): >> HEADER    TRANSFERASE                             08-SEP-09   2KO1              
  > ReadCoordsPdb(): >> TITLE     SOLUTION NMR STRUCTURE OF THE ACT DOMAIN FROM GTP                     
  > ReadCoordsPdb(): >> TITLE    2 PYROPHOSPHOKINASE OF CHLOROBIUM TEPIDUM. NORTHEAST                   
  > ReadCoordsPdb(): >> TITLE    3 STRUCTURAL GENOMICS CONSORTIUM TARGET CTR148A                        
  > ReadCoordsPdb(): >> COMPND    MOL_ID: 1;                                                            
   1  > ReadCoordsPdb(): Counting models in file `CTR148A_NMR_em_bcr3.pdb'; Model:    2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
  > ReadCoordsPdb(): After scanning there is(are) 20 model(s) 
  > ReadCoordsPdb(): what model do you want [(1 to 20) or all] ?_   > ReadCoordsPdb(): I'm reading file CTR148A_NMR_em_bcr3.pdb MODEL     1 

  > ReadCoordsPdb(): *** SUMMARY ***
  > ReadCoordsPdb(): -->  2858 ATOM records read from file 
  > ReadCoordsPdb(): -->  2858 Regular IUPAC Atoms 
  > ReadCoordsPdb(): -->     0 Pseudo-atoms (DISMAN type) 
  > ReadCoordsPdb(): -->     0 Lone pairs
  > ReadCoordsPdb(): Bye ... 
  > =============================== INFO ================================ 
  > INFO_mol: # atoms:     2858 (884 C, 1452 H, 256 O, 256 N, 10 S, 0 Q, 0 Metals)
  > INFO_mol: # residues:     176 (Avg. mol. weight: 114.1)
  > INFO_mol: # -- M.W. : 20082.9 g/mol. (20.08 kD)     Estimated RoG <S2>:  15.69 
  > INFO_mol: CenterMass() -- Working PDB model 1 in file, model no. 1 
  > INFO_mol: CenterMass() -- Molecule `CTR148A_NMR_em_bcr3.pdb' model #1, TOTAL RESIDUES: 176
  > INFO_mol: Radius of Gyration <S2> :    16.3648  angstroms 
  > INFO_mol: Center of Masses: x_cm(-1.465), y_cm(-0.792), z_cm(0.140) 

  > INFO_res:  MTDFLAGIRI VGEDKNGMTN QITGVISKFD TNIRTIVLNA KDGIFTCNLM 
  > INFO_res:  IFVKNTDKLT TLMDKLRKVQ GVFTVERLSN LEHHHHHHMT DFLAGIRIVG 
  > INFO_res:  EDKNGMTNQI TGVISKFDTN IRTIVLNAKD GIFTCNLMIF VKNTDKLTTL 
  > INFO_res:  MDKLRKVQGV FTVERLSNLE HHHHHH
  > INFO_res:  
  > INFO_res:  MET  THR  ASP  PHE  LEU  ALA  GLY  ILE  ARG  ILE  VAL  GLY  
  > INFO_res:  GLU  ASP  LYS  ASN  GLY  MET  THR  ASN  GLN  ILE  THR  GLY  
  > INFO_res:  VAL  ILE  SER  LYS  PHE  ASP  THR  ASN  ILE  ARG  THR  ILE  
  > INFO_res:  VAL  LEU  ASN  ALA  LYS  ASP  GLY  ILE  PHE  THR  CYS  ASN  
  > INFO_res:  LEU  MET  ILE  PHE  VAL  LYS  ASN  THR  ASP  LYS  LEU  THR  
  > INFO_res:  THR  LEU  MET  ASP  LYS  LEU  ARG  LYS  VAL  GLN  GLY  VAL  
  > INFO_res:  PHE  THR  VAL  GLU  ARG  LEU  SER  ASN  LEU  GLU  HIS  HIS  
  > INFO_res:  HIS  HIS  HIS  HIS  MET  THR  ASP  PHE  LEU  ALA  GLY  ILE  
  > INFO_res:  ARG  ILE  VAL  GLY  GLU  ASP  LYS  ASN  GLY  MET  THR  ASN  
  > INFO_res:  GLN  ILE  THR  GLY  VAL  ILE  SER  LYS  PHE  ASP  THR  ASN  
  > INFO_res:  ILE  ARG  THR  ILE  VAL  LEU  ASN  ALA  LYS  ASP  GLY  ILE  
  > INFO_res:  PHE  THR  CYS  ASN  LEU  MET  ILE  PHE  VAL  LYS  ASN  THR  
  > INFO_res:  ASP  LYS  LEU  THR  THR  LEU  MET  ASP  LYS  LEU  ARG  LYS  
  > INFO_res:  VAL  GLN  GLY  VAL  PHE  THR  VAL  GLU  ARG  LEU  SER  ASN  
  > INFO_res:  LEU  GLU  HIS  HIS  HIS  HIS  HIS  HIS  
  > INFO_res:  
  > INFO_res:   4 ALA     8 ARG    14 ASN    12 ASP     2 CYS     4 GLN  
  > INFO_res:   6 GLU    12 GLY    12 HIS    16 ILE    16 LEU    14 LYS  
  > INFO_res:   8 MET    10 PHE     4 SER    20 THR    14 VAL  
  > INFO_res: DISULFIDE: ** NO INFO FOR DISULFIDES IN FILE 
  > ===================================================================== 
  > ReadCoordsPdb():  *** x-mer, 2 [2] chains 


PdbStat>   > locate_file(): file `temp.dist' opened for reading 
  > CNSTR_rdr:  Converting DYANA UPL input file 
  > CNSTR_rdr:  5263 constraints read 

  ** WARNING ** _NOT_ all the constraints matched sequence
  ** WARNING ** type 'see noe remo'  to see not matched