PyMOL>load ./CTR107_NMR_em_bcr3.pdb.iupac
HEADER    STRUCTURAL GENOMICS, UNKNOWN FUNCTION   29-DEC-08   2KCU
TITLE     NMR SOLUTION STRUCTURE OF AN UNCHARACTERIZED PROTEIN FROM
TITLE    2 CHLOROBIUM TEPIDUM. NORTHEAST STRUCTURAL GENOMICS TARGET
TITLE    3 CTR107
COMPND    MOL_ID: 1;
COMPND   2 MOLECULE: PROTEIN CTR107;
COMPND   3 CHAIN: A;
COMPND   4 ENGINEERED: YES
 ObjectMolecule: Read secondary structure assignments.
 ObjectMolReadPDBStr: read MODEL 1
 ObjectMolReadPDBStr: read MODEL 2
 ObjectMolReadPDBStr: read MODEL 3
 ObjectMolReadPDBStr: read MODEL 4
 ObjectMolReadPDBStr: read MODEL 5
 ObjectMolReadPDBStr: read MODEL 6
 ObjectMolReadPDBStr: read MODEL 7
 ObjectMolReadPDBStr: read MODEL 8
 ObjectMolReadPDBStr: read MODEL 9
 ObjectMolReadPDBStr: read MODEL 10
 ObjectMolReadPDBStr: read MODEL 11
 ObjectMolReadPDBStr: read MODEL 12
 ObjectMolReadPDBStr: read MODEL 13
 ObjectMolReadPDBStr: read MODEL 14
 ObjectMolReadPDBStr: read MODEL 15
 ObjectMolReadPDBStr: read MODEL 16
 ObjectMolReadPDBStr: read MODEL 17
 ObjectMolReadPDBStr: read MODEL 18
 ObjectMolReadPDBStr: read MODEL 19
 ObjectMolReadPDBStr: read MODEL 20
 CmdLoad: "./CTR107_NMR_em_bcr3.pdb.iupac" loaded as "CTR107_NMR_em_bcr3.pdb.iupac".
PyMOL>hide everything, all
PyMOL>dss
PyMOL>set stick_transparency,0.6
 Setting: stick_transparency set to 0.60000.
PyMOL>set cartoon_transparency,0.5
 Setting: cartoon_transparency set to 0.50000.
PyMOL>show cartoon, all
PyMOL>set bg_rgb, [1,1,1]
 Setting: bg_rgb set to [ 1.00000, 1.00000, 1.00000 ].
PyMOL>color blue, all
 Executive: Colored 2495 atoms and 1 object.
PyMOL>set label_color,black
 Setting: label_color set to black.
PyMOL>set label_font_id, 4
 Setting: label_font_id set to 4.
PyMOL>set label_size,3
 Setting: label_size set to 3.00000.
PyMOL>set_color color11, [0, 3, 255]
 Color: "color11" defined as [ 0.000, 0.012, 1.000 ].
PyMOL>color color11, resi 11
 Executive: Colored 19 atoms.
PyMOL>set_color color16, [0, 243, 255]
 Color: "color16" defined as [ 0.000, 0.953, 1.000 ].
PyMOL>color color16, resi 16
 Executive: Colored 14 atoms.
PyMOL>set_color color19, [0, 7, 255]
 Color: "color19" defined as [ 0.000, 0.027, 1.000 ].
PyMOL>color color19, resi 19
 Executive: Colored 10 atoms.
PyMOL>set_color color20, [0, 96, 255]
 Color: "color20" defined as [ 0.000, 0.376, 1.000 ].
PyMOL>color color20, resi 20
 Executive: Colored 19 atoms.
PyMOL>set_color color21, [0, 255, 98]
 Color: "color21" defined as [ 0.000, 1.000, 0.384 ].
PyMOL>color color21, resi 21
 Executive: Colored 19 atoms.
PyMOL>set_color color22, [0, 38, 255]
 Color: "color22" defined as [ 0.000, 0.149, 1.000 ].
PyMOL>color color22, resi 22
 Executive: Colored 19 atoms.
PyMOL>set_color color26, [0, 135, 255]
 Color: "color26" defined as [ 0.000, 0.529, 1.000 ].
PyMOL>color color26, resi 26
 Executive: Colored 14 atoms.
PyMOL>set_color color31, [0, 67, 255]
 Color: "color31" defined as [ 0.000, 0.263, 1.000 ].
PyMOL>color color31, resi 31
 Executive: Colored 19 atoms.
PyMOL>set_color color34, [0, 36, 255]
 Color: "color34" defined as [ 0.000, 0.141, 1.000 ].
PyMOL>color color34, resi 34
 Executive: Colored 19 atoms.
PyMOL>set_color color35, [0, 235, 255]
 Color: "color35" defined as [ 0.000, 0.922, 1.000 ].
PyMOL>color color35, resi 35
 Executive: Colored 20 atoms.
PyMOL>set_color color49, [0, 57, 255]
 Color: "color49" defined as [ 0.000, 0.224, 1.000 ].
PyMOL>color color49, resi 49
 Executive: Colored 17 atoms.
PyMOL>set_color color51, [0, 114, 255]
 Color: "color51" defined as [ 0.000, 0.447, 1.000 ].
PyMOL>color color51, resi 51
 Executive: Colored 22 atoms.
PyMOL>set_color color57, [0, 255, 185]
 Color: "color57" defined as [ 0.000, 1.000, 0.725 ].
PyMOL>color color57, resi 57
 Executive: Colored 14 atoms.
PyMOL>set_color color58, [255, 252, 0]
 Color: "color58" defined as [ 1.000, 0.988, 0.000 ].
PyMOL>color color58, resi 58
 Executive: Colored 20 atoms.
PyMOL>show sticks, res 58
PyMOL>set_color color59, [0, 94, 255]
 Color: "color59" defined as [ 0.000, 0.369, 1.000 ].
PyMOL>color color59, resi 59
 Executive: Colored 10 atoms.
PyMOL>set_color color60, [255, 206, 0]
 Color: "color60" defined as [ 1.000, 0.808, 0.000 ].
PyMOL>color color60, resi 60
 Executive: Colored 24 atoms.
PyMOL>show sticks, res 60
PyMOL>set_color color61, [0, 198, 255]
 Color: "color61" defined as [ 0.000, 0.776, 1.000 ].
PyMOL>color color61, resi 61
 Executive: Colored 21 atoms.
PyMOL>set_color color62, [0, 255, 243]
 Color: "color62" defined as [ 0.000, 1.000, 0.953 ].
PyMOL>color color62, resi 62
 Executive: Colored 20 atoms.
PyMOL>set_color color69, [0, 54, 255]
 Color: "color69" defined as [ 0.000, 0.212, 1.000 ].
PyMOL>color color69, resi 69
 Executive: Colored 20 atoms.
PyMOL>set_color color70, [0, 126, 255]
 Color: "color70" defined as [ 0.000, 0.494, 1.000 ].
PyMOL>color color70, resi 70
 Executive: Colored 15 atoms.
PyMOL>set_color color71, [0, 255, 131]
 Color: "color71" defined as [ 0.000, 1.000, 0.514 ].
PyMOL>color color71, resi 71
 Executive: Colored 16 atoms.
PyMOL>set_color color73, [0, 122, 255]
 Color: "color73" defined as [ 0.000, 0.478, 1.000 ].
PyMOL>color color73, resi 73
 Executive: Colored 20 atoms.
PyMOL>set_color color74, [0, 255, 245]
 Color: "color74" defined as [ 0.000, 1.000, 0.961 ].
PyMOL>color color74, resi 74
 Executive: Colored 7 atoms.
PyMOL>set_color color75, [255, 42, 0]
 Color: "color75" defined as [ 1.000, 0.165, 0.000 ].
PyMOL>color color75, resi 75
 Executive: Colored 20 atoms.
PyMOL>show sticks, res 75
PyMOL>set_color color76, [255, 48, 0]
 Color: "color76" defined as [ 1.000, 0.188, 0.000 ].
PyMOL>color color76, resi 76
 Executive: Colored 14 atoms.
PyMOL>show sticks, res 76
PyMOL>set_color color81, [0, 216, 255]
 Color: "color81" defined as [ 0.000, 0.847, 1.000 ].
PyMOL>color color81, resi 81
 Executive: Colored 16 atoms.
PyMOL>set_color color83, [0, 44, 255]
 Color: "color83" defined as [ 0.000, 0.173, 1.000 ].
PyMOL>color color83, resi 83
 Executive: Colored 7 atoms.
PyMOL>set_color color87, [0, 61, 255]
 Color: "color87" defined as [ 0.000, 0.239, 1.000 ].
PyMOL>color color87, resi 87
 Executive: Colored 16 atoms.
PyMOL>set_color color88, [0, 28, 255]
 Color: "color88" defined as [ 0.000, 0.110, 1.000 ].
PyMOL>color color88, resi 88
 Executive: Colored 16 atoms.
PyMOL>set_color color89, [0, 123, 255]
 Color: "color89" defined as [ 0.000, 0.482, 1.000 ].
PyMOL>color color89, resi 89
 Executive: Colored 14 atoms.
PyMOL>set_color color91, [0, 255, 250]
 Color: "color91" defined as [ 0.000, 1.000, 0.980 ].
PyMOL>color color91, resi 91
 Executive: Colored 19 atoms.
PyMOL>set_color color98, [0, 52, 255]
 Color: "color98" defined as [ 0.000, 0.204, 1.000 ].
PyMOL>color color98, resi 98
 Executive: Colored 10 atoms.
PyMOL>set_color color99, [0, 145, 255]
 Color: "color99" defined as [ 0.000, 0.569, 1.000 ].
PyMOL>color color99, resi 99
 Executive: Colored 11 atoms.
PyMOL>set_color color100, [0, 90, 255]
 Color: "color100" defined as [ 0.000, 0.353, 1.000 ].
PyMOL>color color100, resi 100
 Executive: Colored 11 atoms.
PyMOL>set_color color102, [0, 219, 255]
 Color: "color102" defined as [ 0.000, 0.859, 1.000 ].
PyMOL>color color102, resi 102
 Executive: Colored 21 atoms.
PyMOL>set_color color106, [0, 123, 255]
 Color: "color106" defined as [ 0.000, 0.482, 1.000 ].
PyMOL>color color106, resi 106
 Executive: Colored 21 atoms.
PyMOL>set_color color109, [0, 209, 255]
 Color: "color109" defined as [ 0.000, 0.820, 1.000 ].
PyMOL>color color109, resi 109
 Executive: Colored 19 atoms.
PyMOL>set_color color111, [0, 42, 255]
 Color: "color111" defined as [ 0.000, 0.165, 1.000 ].
PyMOL>color color111, resi 111
 Executive: Colored 10 atoms.
PyMOL>set_color color112, [0, 223, 255]
 Color: "color112" defined as [ 0.000, 0.875, 1.000 ].
PyMOL>color color112, resi 112
 Executive: Colored 16 atoms.
PyMOL>set_color color113, [0, 190, 255]
 Color: "color113" defined as [ 0.000, 0.745, 1.000 ].
PyMOL>color color113, resi 113
 Executive: Colored 21 atoms.
PyMOL>set_color color116, [0, 138, 255]
 Color: "color116" defined as [ 0.000, 0.541, 1.000 ].
PyMOL>color color116, resi 116
 Executive: Colored 19 atoms.
PyMOL>set_color color117, [0, 255, 164]
 Color: "color117" defined as [ 0.000, 1.000, 0.643 ].
PyMOL>color color117, resi 117
 Executive: Colored 17 atoms.
PyMOL>set_color color119, [0, 255, 247]
 Color: "color119" defined as [ 0.000, 1.000, 0.969 ].
PyMOL>color color119, resi 119
 Executive: Colored 24 atoms.
PyMOL>set_color color120, [117, 255, 0]
 Color: "color120" defined as [ 0.459, 1.000, 0.000 ].
PyMOL>color color120, resi 120
 Executive: Colored 16 atoms.
PyMOL>set_color color123, [0, 29, 255]
 Color: "color123" defined as [ 0.000, 0.114, 1.000 ].
PyMOL>color color123, resi 123
 Executive: Colored 14 atoms.
PyMOL>set_color color130, [0, 42, 255]
 Color: "color130" defined as [ 0.000, 0.165, 1.000 ].
PyMOL>color color130, resi 130
 Executive: Colored 15 atoms.
PyMOL>set_color color132, [255, 157, 0]
 Color: "color132" defined as [ 1.000, 0.616, 0.000 ].
PyMOL>color color132, resi 132
 Executive: Colored 21 atoms.
PyMOL>show sticks, res 132
PyMOL>set_color color133, [191, 255, 0]
 Color: "color133" defined as [ 0.749, 1.000, 0.000 ].
PyMOL>color color133, resi 133
 Executive: Colored 15 atoms.
PyMOL>set_color color134, [0, 240, 255]
 Color: "color134" defined as [ 0.000, 0.941, 1.000 ].
PyMOL>color color134, resi 134
 Executive: Colored 19 atoms.
PyMOL>set_color color135, [0, 52, 255]
 Color: "color135" defined as [ 0.000, 0.204, 1.000 ].
PyMOL>color color135, resi 135
 Executive: Colored 21 atoms.
PyMOL>set_color color138, [255, 119, 0]
 Color: "color138" defined as [ 1.000, 0.467, 0.000 ].
PyMOL>color color138, resi 138
 Executive: Colored 14 atoms.
PyMOL>show sticks, res 138
PyMOL>set_color color139, [255, 66, 0]
 Color: "color139" defined as [ 1.000, 0.259, 0.000 ].
PyMOL>color color139, resi 139
 Executive: Colored 14 atoms.
PyMOL>show sticks, res 139
PyMOL>set_color color147, [0, 19, 255]
 Color: "color147" defined as [ 0.000, 0.075, 1.000 ].
PyMOL>color color147, resi 147
 Executive: Colored 19 atoms.
PyMOL>set_color color149, [0, 228, 255]
 Color: "color149" defined as [ 0.000, 0.894, 1.000 ].
PyMOL>color color149, resi 149
 Executive: Colored 14 atoms.
PyMOL>set_color color150, [0, 59, 255]
 Color: "color150" defined as [ 0.000, 0.231, 1.000 ].
PyMOL>color color150, resi 150
 Executive: Colored 24 atoms.
PyMOL>set_color color151, [255, 231, 0]
 Color: "color151" defined as [ 1.000, 0.906, 0.000 ].
PyMOL>color color151, resi 151
 Executive: Colored 16 atoms.
PyMOL>show sticks, res 151
PyMOL>set_color color152, [0, 84, 255]
 Color: "color152" defined as [ 0.000, 0.329, 1.000 ].
PyMOL>color color152, resi 152
 Executive: Colored 11 atoms.
PyMOL>set_color color155, [0, 52, 255]
 Color: "color155" defined as [ 0.000, 0.204, 1.000 ].
PyMOL>color color155, resi 155
 Executive: Colored 19 atoms.
PyMOL>label 58/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 60/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 75/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 76/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 132/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 138/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 139/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>label 151/ca,"%s" %(resi)
 Label: labelled 1 atoms.
PyMOL>orient
PyMOL>ray 800,800
 Ray: render time: 1.05 sec. = 3425.4 frames/hour (1.05 sec. accum.).
PyMOL>png precision.png
 ScenePNG: wrote 800x800 pixel image to file "precision.png".
PyMOL>quit