PROCHECK-NMR. PROCHECK v.3.5.4 (Feb 2001) ----------------------------------------- Coordinates file: [ Zdom1.pdb ] Ranges file: [ Zdom1.ranges ] Program directory: /usr/local/procheck Running clean-up on file: Zdom1.pdb * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * ASP 11 GLU 28 GLU 37 GLU 38 ARG 40 PHE 43 GLU 60 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * PHE 4 PHE 18 PHE 26 GLU 37 ARG 40 ASP 49 ASP 50 * ASP 66 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * GLU 28 ARG 40 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * ASP 11 ARG 40 PHE 43 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * PHE 4 GLU 12 GLU 21 TYR 27 ARG 40 ASP 66 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * PHE 4 PHE 18 PHE 26 GLU 28 GLU 38 ARG 40 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * ASP 11 ASP 15 PHE 18 TYR 27 GLU 37 GLU 38 ARG 40 * PHE 43 ASP 49 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * ASP 15 GLU 21 TYR 27 ARG 40 PHE 43 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * PHE 4 ASP 15 PHE 18 PHE 26 GLU 38 ARG 40 ASP 66 * Side chain atoms should be swapped for the following residues: * As this is an NMR ensemble the swap has not been made * PHE 4 PHE 26 GLU 28 GLU 37 ARG 40 * NMR ensemble comprises 10 model structures * Program completed ................................................................. Secondary structure assignment * NMR ensemble comprises 10 model structures * Program completed .................................................................. RMS deviations for ensemble * Program completed .................................................................. Phi-psi and chi1-chi2 distributions * * * Model and residue ranges selected in file: Zdom1.ranges * ------------------------------------------ * * ALL models in the ensemble * * From residue 20 to residue 31 * From residue 38 to residue 49 * From residue 54 to residue 68 * Main Ramachandran plot * File: Zdom1_01_ramachand.ps All-residue Ramachandran plots * File: Zdom1_02_allramach.ps All-residue chi1-chi2 plots * File: Zdom1_03_chi1_chi2.ps * Program complete .................................................................. Dihedral angle distributions and quality plots * * * Model and residue ranges selected in file: Zdom1.ranges * ------------------------------------------ * * ALL models in the ensemble * * From residue 20 to residue 31 * From residue 38 to residue 49 * From residue 54 to residue 68 * **** No torsion angle restraints found Phi angle distributions * File: Zdom1_04_phidistrb.ps Psi angle distributions * File: Zdom1_05_psidistrb.ps Chi-1 angle distributions * File: Zdom1_06_ch1distrb.ps Chi-2 angle distributions * File: Zdom1_07_ch2distrb.ps Ensemble Ramachandran plots * File: Zdom1_08_ensramach.ps Ensemble chi1-chi2 plots * File: Zdom1_09_ensch1ch2.ps Residue properties plot * File: Zdom1_10_residprop.ps Model secondary structures * File: Zdom1_11_modelsecs.ps .................................................................. Restraints and restraint violation plots * * * Model and residue ranges selected in file: Zdom1.ranges * ------------------------------------------ * * ALL models in the ensemble * * From residue 20 to residue 31 * From residue 38 to residue 49 * From residue 54 to residue 68 * * * Restraints read in from file: * Zdom1.nrv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Restraints read in from file: * Zdom1.hrv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Restraints read in from file: * Zdom1.srv * Warning. Restraints file not found: * Number of restraints read in: 0 * * Total number of restraints read in: 0 * **** No distance restraints found **** No torsion angle restraints found * **** No restraints found, so no restraint plots will be produced ..................................................................